MytuD.17946.a
DNA ligase A (Rv3014c)
CENTER ID:
MytuD.17946.a
ORGANISM:
Mycobacterium tuberculosis H37Rv
ASSOCIATED DISEASE:
Tuberculosis
CURRENT STATUS:
in PDB
COMMUNITY REQUEST:
True
NIH RISK GROUP:
2
SELECT AGENT:
False
NIH PRIORITY
pathogens category:
IIIC
Ordering Clones & Proteins
If there are materials available for this target, they will be listed below.
Materials can be ordered from SSGCID using the button in the "order material" column.
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Clones*
CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO
AA
START
AA
STOP
ORDER
MATERIAL
MytuD.17946.a.B1.GE40372
full length
info
1
691
MytuD.17946.a.B1.GE40372
MytuD.17946.a.B2.GE40367
domain based on PDB 1ZAU
info
1
328
MytuD.17946.a.B2.GE40367
MytuD.17946.a.B3.GE40368
domain based on PDB 3SGI
info
2
605
MytuD.17946.a.B3.GE40368
MytuD.17946.a.B4.GE40369
Domain 4
info
78
605
MytuD.17946.a.B4.GE40369
MytuD.17946.a.B5.GE40370
Domain 5
info
78
328
MytuD.17946.a.B5.GE40370
MytuD.17946.a.B6.GE40371
Domain 6
info
1
417
MytuD.17946.a.B6.GE40371
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis . Get sequence information
using the button in the "info" column.
Proteins
CENTER REFERENCE ID
DOMAIN/REGION DESCRIPTION
INFO
AA START
AA STOP
ORDER MATERIAL
MytuD.17946.a.B3.PS38124
domain based on PDB 3SGI
info
2
605
PS38124
MytuD.17946.a.B2.PS38127
domain based on PDB 1ZAU
info
1
328
PS38127
MytuD.17946.a.B1.PS38422
full length
info
1
691
PS38422
MytuD.17946.a.B4.PW38452
Domain 4
info
78
605
PW38452
Structures
7K72
DEPOSITED: 9/22/2020
DETERMINATION: XRay
CLONE: MytuD.17946.a.B4.GE40369
PROTEIN: MytuD.17946.a.B4.PW38452
Orthologues for Rv3014c
Species
% Identity
% Coverage
Clones
Proteins
Structures
leprae
85
99
1
0
0
Sequences
These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols.
To find the specific sequence of any material you may have ordered, click on the "info" button next to the name of that material.
AA Sequence
MSSPDADQTA PEVLRQWQAL AEEVREHQFR YYVRDAPIIS DAEFDELLRR LEALEEQHPE LRTPDSPTQL VGGAGFATDF EPVDHLERML SLDNAFTADE LAAWAGRIHA EVGDAAHYLC ELKIDGVALS LVYREGRLTR ASTRGDGRTG EDVTLNARTI ADVPERLTPG DDYPVPEVLE VRGEVFFRLD DFQALNASLV EEGKAPFANP RNSAAGSLRQ KDPAVTARRR LRMICHGLGH VEGFRPATLH QAYLALRAWG LPVSEHTTLA TDLAGVRERI DYWGEHRHEV DHEIDGVVVK VDEVALQRRL GSTSRAPRWA IAYKYPPEEA QTKLLDIRVN VGRTGRITPF AFMTPVKVAG STVGQATLHN ASEIKRKGVL IGDTVVIRKA GDVIPEVLGP VVELRDGSER EFIMPTTCPE CGSPLAPEKE GDADIRCPNA RGCPGQLRER VFHVASRNGL DIEVLGYEAG VALLQAKVIA DEGELFALTE RDLLRTDLFR TKAGELSANG KRLLVNLDKA KAAPLWRVLV ALSIRHVGPT AARALATEFG SLDAIAAAST DQLAAVEGVG PTIAAAVTEW FAVDWHREIV DKWRAAGVRM VDERDESVPR TLAGLTIVVT GSLTGFSRDD AKEAIVARGG KAAGSVSKKT NYVVAGDSPG SKYDKAVELG VPILDEDGFR RLLADGPASR T
NT Sequence
gtgagctccc cagacgccga tcagaccgct cccgaggtgt tgcggcagtg gcaggcactg gccgaggagg tgcgtgagca ccagttccgt tattacgtgc gggacgcgcc gatcatcagc gacgcggaat tcgacgagct gctgcgccgt ctggaagccc tcgaggagca gcatcccgag ctgcgcacgc ccgattcgcc gacccagctg gtcggcggtg ccggcttcgc cacggatttc gagcccgtcg accatctcga acgaatgctc agcctcgaca acgcgttcac cgccgacgaa ctcgccgcct gggccggccg catccatgcc gaggtcggag acgccgcaca ttacctgtgt gagctcaaga tcgacggcgt cgcgctgtct ttggtctacc gcgagggacg gctgacccgg gcctccaccc gcggcgacgg gcgcaccggc gaggacgtca ccctgaacgc ccggaccatc gccgacgttc ccgaacggct cacccccggc gacgactacc cggtgcccga ggtcctcgag gtccgcggcg aggtcttctt ccggctggac gacttccagg cgctcaacgc cagcctcgtc gaggagggca aggcgccgtt cgccaacccc cgcaacagcg cggcgggatc gctgcgccag aaagacccgg cggtcaccgc gcgccgccgg ctgcggatga tctgccacgg gctgggccac gtggagggct ttcgcccggc caccctgcat caggcatacc tggcgttgcg ggcatgggga ctgccggttt ccgaacacac caccctggca accgacctgg ccggtgtgcg cgagcgcatc gactactggg gcgagcaccg ccacgaggtg gaccacgaaa tcgacggcgt ggtggtcaaa gtcgacgagg tggcgttgca gcgcaggctg ggttccacgt cgcgggcgcc gcgctgggcc atcgcctaca agtacccgcc cgaggaagcg cagaccaagc tgctcgacat ccgggtgaac gtcggccgca ccgggcggat cacgccgttt gcgttcatga cgccggtgaa ggtggccggg tcgacggtgg gacaggccac cctgcacaac gcctcggaga tcaagcgcaa gggcgtgctg atcggcgaca ccgtggtgat ccgcaaggcc ggcgacgtga tccccgaggt gctgggaccc gtcgtcgaac tgcgcgatgg ctccgaacgc gaattcatca tgcccaccac ctgcccggag tgcggttcgc cgttggcgcc ggagaaggaa ggcgacgccg acatccgttg ccccaacgcc cgcggctgcc cggggcaact gcgggagcgg gttttccacg tcgccagccg caacggccta gacatcgagg tgctcggtta cgaggcgggt gtggcgctct tgcaggcgaa ggtgatcgcc gacgagggcg agctgttcgc gctgaccgag cgggacttgc tgcgcaccga cctgttccga accaaggcag gcgaactgtc ggccaacggc aaacggctgc tggtcaacct cgacaaggcc aaggcggcac cgctgtggcg ggtgctggtg gcgctgtcca tccgccatgt cgggccgacg gcggcccgcg ccctggccac cgagttcggc agccttgacg ccatcgccgc ggcgtccacc gaccagctgg ccgccgtcga gggggtgggg ccgaccattg ccgccgcggt caccgagtgg ttcgccgtcg actggcaccg cgagatcgtc gacaagtggc gggccgccgg ggtgcgaatg gtcgacgagc gtgacgagag tgtgccacgc acgctggccg ggctgaccat cgtggtcacc ggctcgctga ccggtttctc ccgcgacgac gccaaggagg cgatcgtggc ccgcggcggc aaggccgccg gctcggtgtc gaagaagacc aactatgtcg tcgccggaga ctcgccggga tccaaatacg acaaggcggt ggagttgggg gtgccgattc tggacgagga tgggttccgg agactgctgg ccgacggacc cgcgtcacga acgtaa
Details for MytuD.17946.a.B1.GE40372
HARVESTED ON:
7/15/2016
SEQUENCED ON:
7/18/2016
EXPECTED MW:
76kDa
OBSERVED MW:
76kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Good (10-50)
TOTAL EXPRESSION LEVEL:
Low Expression
SOLUBLE EXPRESSION LEVEL
Low Expression
EXPRESSION HOST:
BL 21 (DE3) Rosetta
SEQUENCING RESULT:
PERCENT IDENTITY:
data unavailable
PERCENT COVERAGE:
data unavailable
Details for MytuD.17946.a.B2.GE40367
HARVESTED ON:
7/15/2016
SEQUENCED ON:
7/18/2016
EXPECTED MW:
38kDa
OBSERVED MW:
38kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Good (10-50)
TOTAL EXPRESSION LEVEL:
Moderate Expression
SOLUBLE EXPRESSION LEVEL
Moderate Expression
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
PERCENT IDENTITY:
data unavailable
PERCENT COVERAGE:
data unavailable
Details for MytuD.17946.a.B3.GE40368
HARVESTED ON:
7/15/2016
SEQUENCED ON:
7/18/2016
EXPECTED MW:
67kDa
OBSERVED MW:
67kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Good (10-50)
TOTAL EXPRESSION LEVEL:
Moderate Expression
SOLUBLE EXPRESSION LEVEL
Moderate Expression
EXPRESSION HOST:
BL 21 (DE3) Rosetta
SEQUENCING RESULT:
PERCENT IDENTITY:
data unavailable
PERCENT COVERAGE:
data unavailable
Details for MytuD.17946.a.B4.GE40369
HARVESTED ON:
7/15/2016
SEQUENCED ON:
7/18/2016
EXPECTED MW:
59kDa
OBSERVED MW:
59kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Good (10-50)
TOTAL EXPRESSION LEVEL:
Moderate Expression
SOLUBLE EXPRESSION LEVEL
Low Expression
EXPRESSION HOST:
BL 21 (DE3) Rosetta
SEQUENCING RESULT:
PERCENT IDENTITY:
data unavailable
PERCENT COVERAGE:
data unavailable
Details for MytuD.17946.a.B5.GE40370
HARVESTED ON:
7/15/2016
SEQUENCED ON:
7/18/2016
EXPECTED MW:
29kDa
OBSERVED MW:
30kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Good (10-50)
TOTAL EXPRESSION LEVEL:
Low Expression
SOLUBLE EXPRESSION LEVEL
Low Expression
EXPRESSION HOST:
BL 21 (DE3) Rosetta
SEQUENCING RESULT:
PERCENT IDENTITY:
data unavailable
PERCENT COVERAGE:
data unavailable
Details for MytuD.17946.a.B6.GE40371
HARVESTED ON:
7/15/2016
SEQUENCED ON:
7/18/2016
EXPECTED MW:
47kDa
OBSERVED MW:
47kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Good (10-50)
TOTAL EXPRESSION LEVEL:
Low Expression
SOLUBLE EXPRESSION LEVEL
Low Expression
EXPRESSION HOST:
BL 21 (DE3) Rosetta
SEQUENCING RESULT:
PERCENT IDENTITY:
data unavailable
PERCENT COVERAGE:
data unavailable
Details for MytuD.17946.a.B3.PS38124
PURIFICATION DATe:
11/22/2016
CONCENTRATION:
40.7mg/ml
OBSERVED MW:
67kDa
EXPRESSION LEVEL:
Moderate Expression
PROTEIN PURIFICATION BUFFER:
SEC Buffer
EXPRESSION HOST:
BL 21 (DE3) Rosetta
VIAL COUNT (approx.):
2
VIAL VOLUME:
200µl
PERCENT IDENTITY:
data unavailable
PERCENT COVERAGE:
data unavailable
Details for MytuD.17946.a.B2.PS38127
PURIFICATION DATe:
11/17/2016
CONCENTRATION:
21.72mg/ml
OBSERVED MW:
38kDa
EXPRESSION LEVEL:
Low Expression
PROTEIN PURIFICATION BUFFER:
SEC
EXPRESSION HOST:
data unavailable
VIAL COUNT (approx.):
3
VIAL VOLUME:
110µl
PERCENT IDENTITY:
data unavailable
PERCENT COVERAGE:
data unavailable
Details for MytuD.17946.a.B1.PS38422
PURIFICATION DATe:
2/27/2018
CONCENTRATION:
42.92mg/ml
OBSERVED MW:
76kDa
EXPRESSION LEVEL:
Moderate Expression
PROTEIN PURIFICATION BUFFER:
SEC: 20 mM HEPES pH 7.0, 300 mM NaCl,5% glycerol, 1 mM TCEP
EXPRESSION HOST:
BL 21 (DE3) Rosetta
VIAL COUNT (approx.):
3
VIAL VOLUME:
110µl
PERCENT IDENTITY:
data unavailable
PERCENT COVERAGE:
data unavailable
Details for MytuD.17946.a.B4.PW38452
PURIFICATION DATe:
4/9/2018
CONCENTRATION:
19.33mg/ml
OBSERVED MW:
60kDa
EXPRESSION LEVEL:
Low Expression
PROTEIN PURIFICATION BUFFER:
25 mM HEPES pH 7.0, 500 mM NaCl, 5% Glycerol , 2 mM DTT, 0.025% Azide
EXPRESSION HOST:
BL 21 (DE3) Rosetta
VIAL COUNT (approx.):
1
VIAL VOLUME:
200µl
PERCENT IDENTITY:
data unavailable
PERCENT COVERAGE:
data unavailable