TrbrA.00438.a

nucleoside diphosphate kinase b

CENTER ID: TrbrA.00438.a
ORGANISM: Trypanosoma brucei TREU927
ASSOCIATED DISEASE: African trypanosomiasis (African Sleeping Sickness)
CURRENT STATUS: in PDB
COMMUNITY REQUEST: True
NIH RISK GROUP: 2
SELECT AGENT: False
NIH PRIORITY
pathogens category:
unclassified

Ordering Clones & Proteins

If there are materials available for this target, they will be listed below. Materials can be ordered from SSGCID using the button in the "order material" column. Clicking the button will add the material to a virtual cart. You may order multiple materials at a time at no cost to you, as this contract is funded by NIAID. When you are ready to place your order, click the "Place Order" link which will appear in the top right corner of the page after you place your first item in your cart.

Clones*

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
TrbrA.00438.a.B1.GE34488 full length 1 153
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis. Get sequence information using the button in the "info" column.
Structures
4F36
DEPOSITED: 5/8/2012
DETERMINATION: XRay
CLONE: TrbrA.00438.a.B1.GE34488
PROTEIN: TrbrA.00438.a.B1.PS01459
4F4A
DEPOSITED: 5/10/2012
DETERMINATION: XRay
CLONE: TrbrA.00438.a.B1.GE34488
PROTEIN: TrbrA.00438.a.B1.PS01459
4FKX
DEPOSITED: 6/13/2012
DETERMINATION: XRay
CLONE: TrbrA.00438.a.B1.GE34488
PROTEIN: TrbrA.00438.a.B1.PS01459
4FKY
DEPOSITED: 6/13/2012
DETERMINATION: XRay
CLONE: TrbrA.00438.a.B1.GE34488
PROTEIN: TrbrA.00438.a.B1.PS01459
External Resources
RESOURCE REFERENCE ID
EuPathDB: TritrypDB:Tb11.01.7800
OrthoMCL: OG5_126708
RefSeq: XP_829670.1
UniProt: Q381H3
Sequences
These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "info" button next to the name of that material.
AA Sequence
MPSERTFIAV KPDGVQRNLV GEIIKRFENK GYKLVGLKLL QPTEEQAKQH YIDLASKPFY SGLVSYFSSG PIVGMVWEGL GVVKGGRVLL GATNPADSLP GTIRGDFAVD VGRNVCHGSD SVESAKREIA FWFKAEELVS WTSHSVKQIY ERA
NT Sequence
atgcccagcg agcggacctt cattgcagtc aaacccgatg gcgtgcagcg taatctcgtg ggagaaatca tcaagcgctt cgagaacaag ggctacaaac ttgttggtct caaacttctc cagcccactg aggaacaagc caagcagcac tacattgatc tcgcatcgaa acccttctac agtggccttg tgtcgtactt ttcctctggc cctatcgtcg gtatggtgtg ggagggcctc ggtgttgtaa agggcggccg tgtgcttttg ggcgcaacga accccgcaga ctcgctccct ggcaccattc gtggtgactt cgccgtggat gttggccgca atgtgtgcca tgggtccgac agcgtggaaa gcgccaaacg cgaaatcgcg ttctggttca aggcggagga gctggtaagc tggacgtccc actccgtcaa gcaaatttat gaaagggcat aa
Details for TrbrA.00438.a.B1.GE34488
HARVESTED ON: 2/6/2012
SEQUENCED ON: 2/21/2012
EXPECTED MW: 17kDa
OBSERVED MW: 17kDa
ANTIBIOTIC MARKER: ampicillin
COUNT OF EXPRESSION COLONIES: Too many to count (100+)
TOTAL EXPRESSION LEVEL: Low Expression
SOLUBLE EXPRESSION LEVEL Low Expression
EXPRESSION HOST: data unavailable
SEQUENCING RESULT: pass
PERCENT IDENTITY: 100
PERCENT COVERAGE: 100
Validated AA Sequence
MAHHHHHHMP SERTFIAVKP DGVQRNLVGE IIKRFENKGY KLVGLKLLQP TEEQAKQHYI DLASKPFYSG LVSYFSSGPI VGMVWEGLGV VKGGRVLLGA TNPADSLPGT IRGDFAVDVG RNVCHGSDSV ESAKREIAFW FKAEELVSWT SHSVKQIYER A
Validated NT Sequence
atcttactca cttatgccct ttcataaatt tgcttgacgg agtgggacgt ccagcttacc agctcctccg ccttgaacca gaacgcgatt tcgcgtttgg cgctttccac gctgtcggac ccatggcaca cattgcggcc aacatccacg gcgaagtcac cacgaatggt gccagggagc gagtctgcgg ggttcgttgc gcccaaaagc acacggccgc cctttacaac accgaggccc tcccacacca taccgacgat agggccagag gaaaagtacg acacaaggcc actgtagaag ggtttcgatg cgagatcaat gtagtgctgc ttggcttgtt cctcagtggg ctggagaagt ttgagaccaa caagtttgta gcccttgttc tcgaagcgct tgatgatttc tcccacgaga ttacgctgca cgccatcggg tttgactgca atgaaggtcc gctcgctggg catatggtgg tggtggtggt gagccat
Expected Protein Sequence
MAHHHHHHMP SERTFIAVKP DGVQRNLVGE IIKRFENKGY KLVGLKLLQP TEEQAKQHYI DLASKPFYSG LVSYFSSGPI VGMVWEGLGV VKGGRVLLGA TNPADSLPGT IRGDFAVDVG RNVCHGSDSV ESAKREIAFW FKAEELVSWT SHSVKQIYER A
Full NT Sequence (Expression Vector + Insert)
taatacgact cactataggg agaccacaac ggtttccctc tagaaataat tttgtttaac tttaagaagg agatatacca tggctcacca ccaccaccac catatgccca gcgagcggac cttcattgca gtcaaacccg atggcgtgca gcgtaatctc gtgggagaaa tcatcaagcg cttcgagaac aagggctaca aacttgttgg tctcaaactt ctccagccca ctgaggaaca agccaagcag cactacattg atctcgcatc gaaacccttc tacagtggcc ttgtgtcgta cttttcctct ggccctatcg tcggtatggt gtgggagggc ctcggtgttg taaagggcgg ccgtgtgctt ttgggcgcaa cgaaccccgc agactcgctc cctggcacca ttcgtggtga cttcgccgtg gatgttggcc gcaatgtgtg ccatgggtcc gacagcgtgg aaagcgccaa acgcgaaatc gcgttctggt tcaaggcgga ggagctggta agctggacgt cccactccgt caagcaaatt tatgaaaggg catgagtaag ataggatccg gctgctaaca aagcccgaaa ggaagctgag ttggctgctg ccaccgctga gcaataacta gcataacccc ttggggcctc taaacgggtc ttgaggggtt ttttgctgaa aggaggaact atatccggat atccacagga cgggtgtggt cgccatgatc gcgtagtcga tagtggctcc aagtagcgaa gcgagcagga ctgggcggcg gccaaagcgg tcggacagtg ctccgagaac gggtgcgcat agaaattgca tcaacgcata tagcgctagc agcacgccat agtgactggc gatgctgtcg gaatggacga tatcccgcaa gaggcccggc agtaccggca taaccaagcc tatgcctaca gcatccaggg tgacggtgcc gaggatgacg atgagcgcat tgttagattt catacacggt gcctgactgc gttagcaatt taactgtgat aaactaccgc attaaagctt atcgatgata agctgtcaaa catgagaatt cttgaagacg aaagggcctc gtgatacgcc tatttttata ggttaatgtc atgataataa tggtttctta gacgtcaggt ggcacttttc ggggaaatgt gcgcggaacc cctatttgtt tatttttcta aatacattca aatatgtatc cgctcatgag acaataaccc tgataaatgc ttcaataata ttgaaaaagg aagagtatga gtattcaaca tttccgtgtc gcccttattc ccttttttgc ggcattttgc cttcctgttt ttgctcaccc agaaacgctg gtgaaagtaa aagatgctga agatcagttg ggtgcacgag tgggttacat cgaactggat ctcaacagcg gtaagatcct tgagagtttt cgccccgaag aacgttttcc aatgatgagc acttttaaag ttctgctatg tggcgcggta ttatcccgtg ttgacgccgg gcaagagcaa ctcggtcgcc gcatacacta ttctcagaat gacttggttg agtactcacc agtcacagaa aagcatctta cggatggcat gacagtaaga gaattatgca gtgctgccat aaccatgagt gataacactg cggccaactt acttctgaca acgatcggag gaccgaagga gctaaccgct tttttgcaca acatggggga tcatgtaact cgccttgatc gttgggaacc ggagctgaat gaagccatac caaacgacga gcgtgacacc acgatgcctg cagcaatggc aacaacgttg cgcaaactat taactggcga actacttact ctagcttccc ggcaacaatt aatagactgg atggaggcgg ataaagttgc aggaccactt ctgcgctcgg cccttccggc tggctggttt attgctgata aatctggagc cggtgagcgt gggtctcgcg gtatcattgc agcactgggg ccagatggta agccctcccg tatcgtagtt atctacacga cggggagtca ggcaactatg gatgaacgaa atagacagat cgctgagata ggtgcctcac tgattaagca ttggtaactg tcagaccaag tttactcata tatactttag attgatttaa aacttcattt ttaatttaaa aggatctagg tgaagatcct ttttgataat ctcatgacca aaatccctta acgtgagttt tcgttccact gagcgtcaga ccccgtagaa aagatcaaag gatcttcttg agatcctttt tttctgcgcg taatctgctg cttgcaaaca aaaaaaccac cgctaccagc ggtggtttgt ttgccggatc aagagctacc aactcttttt ccgaaggtaa ctggcttcag cagagcgcag ataccaaata ctgtccttct agtgtagccg tagttaggcc accacttcaa gaactctgta gcaccgccta catacctcgc tctgctaatc ctgttaccag tggctgctgc cagtggcgat aagtcgtgtc ttaccgggtt ggactcaaga cgatagttac cggataaggc gcagcggtcg ggctgaacgg ggggttcgtg cacacagccc agcttggagc gaacgaccta caccgaactg agatacctac agcgtgagct atgagaaagc gccacgcttc ccgaagggag aaaggcggac aggtatccgg taagcggcag ggtcggaaca ggagagcgca cgagggagct tccaggggga aacgcctggt atctttatag tcctgtcggg tttcgccacc tctgacttga gcgtcgattt ttgtgatgct cgtcaggggg gcggagccta tggaaaaacg ccagcaacgc ggccttttta cggttcctgg ccttttgctg gccttttgct cacatgttct ttcctgcgtt atcccctgat tctgtggata accgtattac cgcctttgag tgagctgata ccgctcgccg cagccgaacg accgagcgca gcgagtcagt gagcgaggaa gcggaagagc gcctgatgcg gtattttctc cttacgcatc tgtgcggtat ttcacaccgc atatatggtg cactctcagt acaatctgct ctgatgccgc atagttaagc cagtatacac tccgctatcg ctacgtgact gggtcatggc tgcgccccga cacccgccaa cacccgctga cgcgccctga cgggcttgtc tgctcccggc atccgcttac agacaagctg tgaccgtctc cgggagctgc atgtgtcaga ggttttcacc gtcatcaccg aaacgcgcga ggcagctgcg gtaaagctca tcagcgtggt cgtgaagcga ttcacagatg tctgcctgtt catccgcgtc cagctcgttg agtttctcca gaagcgttaa tgtctggctt ctgataaagc gggccatgtt aagggcggtt ttttcctgtt tggtcactga tgcctccgtg taagggggat ttctgttcat gggggtaatg ataccgatga aacgagagag gatgctcacg atacgggtta ctgatgatga acatgcccgg ttactggaac gttgtgaggg taaacaactg gcggtatgga tgcggcggga ccagagaaaa atcactcagg gtcaatgcca gcgcttcgtt aatacagatg taggtgttcc acagggtagc cagcagcatc ctgcgatgca gatccggaac ataatggtgc agggcgctga cttccgcgtt tccagacttt acgaaacacg gaaaccgaag accattcatg ttgttgctca ggtcgcagac gttttgcagc agcagtcgct tcacgttcgc tcgcgtatcg gtgattcatt ctgctaacca gtaaggcaac cccgccagcc tagccgggtc ctcaacgaca ggagcacgat catgcgcacc cgtggccagg acccaacgct gcccgagatg cgccgcgtgc ggctgctgga gatggcggac gcgatggata tgttctgcca agggttggtt tgcgcattca cagttctccg caagaattga ttggctccaa ttcttggagt ggtgaatccg ttagcgaggt gccgccggct tccattcagg tcgaggtggc ccggctccat gcaccgcgac gcaacgcggg gaggcagaca aggtataggg cggcgcctac aatccatgcc aacccgttcc atgtgctcgc cgaggcggca taaatcgccg tgacgatcag cggtccagtg atcgaagtta ggctggtaag agccgcgagc gatccttgaa gctgtccctg atggtcgtca tctacctgcc tggacagcat ggcctgcaac gcgggcatcc cgatgccgcc ggaagcgaga agaatcataa tggggaaggc catccagcct cgcgtcgcga acgccagcaa gacgtagccc agcgcgtcgg ccgccatgcc ggcgataatg gcctgcttct cgccgaaacg tttggtggcg ggaccagtga cgaaggcttg agcgagggcg tgcaagattc cgaataccgc aagcgacagg ccgatcatcg tcgcgctcca gcgaaagcgg tcctcgccga aaatgaccca gagcgctgcc ggcacctgtc ctacgagttg catgataaag aagacagtca taagtgcggc gacgatagtc atgccccgcg cccaccggaa ggagctgact gggttgaagg ctctcaaggg catcggtcga cgctctccct tatgcgactc ctgcattagg aagcagccca gtagtaggtt gaggccgttg agcaccgccg ccgcaaggaa tggtgcatgc aaggagatgg cgcccaacag tcccccggcc acggggcctg ccaccatacc cacgccgaaa caagcgctca tgagcccgaa gtggcgagcc cgatcttccc catcggtgat gtcggcgata taggcgccag caaccgcacc tgtggcgccg gtgatgccgg ccacgatgcg tccggcgtag aggatcgaga tctcgatccc gcgaaat