MysmA.00010.a

Oxidoreductase, short chain dehydrogenase/reductase family protein

CENTER ID: MysmA.00010.a
ORGANISM: Mycobacterium smegmatis ATCC 700084 / mc(2)155
ASSOCIATED DISEASE:
CURRENT STATUS: in PDB
COMMUNITY REQUEST: True
NIH RISK GROUP: 2
SELECT AGENT: False
NIH PRIORITY
pathogens category:
IIIC

Ordering Clones & Proteins

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Clones*

CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO AA
START
AA
STOP
ORDER
MATERIAL
MysmA.00010.a.A1.GE28568 Full length( MysmA.00010.a ) 1 450
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis. Get sequence information using the button in the "info" column.
Structures
3U0B
DEPOSITED: 9/28/2011
DETERMINATION: XRay
CLONE: MysmA.00010.a.A1.GE28568
PROTEIN: MysmA.00010.a.A1.PW28467
5VP5
DEPOSITED: 5/4/2017
DETERMINATION: XRay
CLONE: MysmA.00010.a.A1.GE28568
PROTEIN: MysmA.00010.a.A1.PW28467
Publications by SSGCID
Increasing the structural coverage of tuberculosis drug targets.
Abendroth J, Abramov A, Armour B, Barrett LK, Baugh L, Begley DW, Buchko GW, Choi R, Clifton MC, Dieterich SH, Dranow DM, Edwards TE, Fairman JW, Ferrell M, Fox D, Gardberg AS, Hewitt SN, Lorimer D, Lyons-Abbott S, Mundt E, Muruthi MM, Myers J, Myler PJ, Napuli AJ, Phan I, Sekar A, Serbzhinskiy D, Stacy R, Staker BL, Stewart LJ, Taylor BM, Thompkins K, Tran N, Van Voorhis WC, Zhang Y
Tuberculosis (Edinb) - 2014
volume 95, issue 2, pages 142-8
PMID: 25613812; PMCID: PMC4361283
External Resources
RESOURCE REFERENCE ID
OrthoMCL: OG5_187141
PATRIC ID: fig|246196.19.peg.369
RefSeq: YP_884785.1
UniProt: A0QPE7
Sequences
These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "info" button next to the name of that material.
AA Sequence
MASDLFSQVV NSGPGSFLAK QLGVPQPETL RRYRPGDPPL AGSLLIGGSG RVAEPLRTAL ADDYNLVSNN IGGRWADSFG GVVFDATGIT EAEGLKELYT FFTPLLRNLA PCARVVVVGT TPAEAGSVHA QVVQRALEGF TRSLGKELRR GATVSLVYLS ADAKPGATGL ESTMRFILSA KSAYVDGQVF RVGAADSTPP ADWDKPLDGK VAVVTGAARG IGATIAEVFA RDGATVVAID VDGAAEDLKR VADKVGGTAL TLDVTADDAV DKITAHVTEH HGGKVDILVN NAGITRDKLL ANMDEKRWDA VIAVNLLAPQ RLTEGLVGNG TIGEGGRVIG LSSMAGIAGN RGQTNYATTK AGMIGLAEAL APVLADKGIT INAVAPGFIE TKMTEAIPLA TREVGRRLNS LFQGGQPVDV AELIAYFASP ASNAVTGNTI RVCGQAMLGA
NT Sequence
GTGGCTTCGG ACCTGTTTTC CCAAGTGGTC AATTCCGGGC CGGGATCGTT CCTGGCCAAG CAGCTGGGCG TGCCGCAGCC CGAGACGTTG CGCCGCTACC GCCCCGGTGA CCCGCCGCTG GCGGGCTCGC TGCTGATCGG CGGATCCGGC CGCGTGGCCG AACCCCTGCG CACCGCATTG GCCGACGACT ACAACCTGGT GTCCAACAAC ATCGGTGGCC GGTGGGCCGA TTCGTTCGGC GGCGTGGTGT TCGACGCCAC GGGCATCACC GAGGCCGAGG GCCTCAAGGA GCTCTACACG TTCTTCACGC CGCTGCTGCG CAACCTCGCG CCGTGTGCGC GGGTGGTCGT CGTCGGCACC ACGCCCGCGG AGGCCGGCAG CGTCCACGCA CAGGTGGTGC AGCGGGCGCT GGAAGGTTTC ACGCGCTCGC TGGGCAAGGA GCTGCGCCGT GGCGCGACCG TCTCCCTGGT CTATCTCTCG GCCGACGCCA AGCCGGGCGC CACGGGTCTC GAGTCGACCA TGCGGTTCAT CCTGTCGGCC AAGTCGGCCT ACGTCGACGG TCAGGTGTTC CGCGTCGGCG CCGCCGATTC GACTCCGCCC GCCGACTGGG ACAAGCCGCT CGACGGCAAG GTCGCCGTGG TCACCGGCGC GGCCCGCGGT ATCGGCGCGA CGATCGCCGA GGTGTTCGCG CGTGACGGCG CGACCGTGGT GGCGATCGAC GTCGACGGTG CGGCCGAGGA TCTCAAGCGC GTCGCCGACA AGGTGGGCGG CACCGCACTC ACGCTCGACG TGACCGCCGA CGACGCCGTC GACAAGATCA CCGCGCACGT CACCGAACAC CATGGCGGCA AGGTCGACAT CCTCGTCAAC AACGCGGGTA TCACGCGCGA CAAGCTGCTC GCCAACATGG ACGAGAAGCG CTGGGACGCG GTGATCGCCG TCAACCTGCT CGCGCCGCAG CGCCTCACCG AAGGCCTGGT GGGCAACGGA ACCATCGGCG AGGGCGGCCG GGTGATCGGC CTGTCGTCGA TGGCGGGCAT CGCGGGCAAC CGCGGCCAGA CCAATTACGC CACCACCAAG GCCGGGATGA TCGGGCTGGC CGAGGCGCTG GCGCCCGTGC TGGCCGACAA GGGCATCACG ATCAACGCCG TCGCACCCGG CTTCATCGAG ACCAAGATGA CCGAGGCCAT CCCGCTCGCC ACGCGTGAGG TGGGCAGGCG GCTCAACTCG CTGTTCCAGG GCGGCCAGCC CGTCGACGTG GCCGAGTTGA TCGCGTACTT CGCCAGCCCC GCCTCGAACG CGGTGACGGG CAACACCATC CGCGTGTGCG GCCAGGCGAT GCTGGGGGCG
Details for MysmA.00010.a.A1.GE28568
HARVESTED ON: 2/17/2010
SEQUENCED ON: 2/24/2010
EXPECTED MW: 48kDa
OBSERVED MW: 48kDa
ANTIBIOTIC MARKER: ampicillin
COUNT OF EXPRESSION COLONIES: Few (1-10)
TOTAL EXPRESSION LEVEL: Moderate Expression
SOLUBLE EXPRESSION LEVEL High Expression
EXPRESSION HOST: data unavailable
SEQUENCING RESULT: pass with incomplete coverage
PERCENT IDENTITY: 100
PERCENT COVERAGE: 97
Validated AA Sequence
MAHHHHHHMG TLEAQTQGPG SMVASDLFSQ VVNSGPGSFL AKQLGVPQPE TLRRYRPGDP PLAGSLLIGG SGRVAEPLRT ALADDYNLVS NNIGGRWADS FGGVVFDATG ITEAEGLKEL YTFFTPLLRN LAPCARVVVV GTTPAEAGSV HAQVVQRALE GFTRSLGKEL RRGATVSLVY LSADAKPGAT GLESTMRFIL SAKSAYVDGQ VFRVGAADST PPADWDKPLD GKVAVVTGAA RGIGATIAEV FARDGATVVA IDVDGAAEDL KRVADKVGGT ALTLDVTADD AVDKITAHVT EHHGGKVDIL VNNAGITRDK LLANMDEKRW DAVIAVNLLA PQRLTEGLVG NGTIGEGGRV IGLSSMAGIA GNRGQTNYAT TKAGMIGLAE ALAPVLADKG ITINAVAPGF IETKMTEAIP LATREVGRRL NSLFQGGQPV DVAELIAYFA SPASNAVTGN T
Validated NT Sequence
atggctcatc accatcacca tcatatgggt accctggaag ctcagaccca gggtcctggt tcgatggtgg cttcggacct gttttcccaa gtggtcaatt ccgggccggg atcgttcctg gccaagcagc tgggcgtgcc gcagcccgag acgttgcgcc gctaccgccc cggtgacccg ccgctggcgg gctcgctgct gatcggcgga tccggccgcg tggccgaacc cctgcgcacc gcattggccg acgactacaa cctggtgtcc aacaacatcg gtggccggtg ggccgattcg ttcggcggcg tggtgttcga cgccacgggc atcaccgagg ccgagggcct caaggagctc tacacgttct tcacgccgct gctgcgcaac ctcgcgccgt gtgcgcgggt ggtcgtcgtc ggcaccacgc ccgcggaggc cggcagcgtc cacgcacagg tggtgcagcg ggcgctggaa ggtttcacgc gctcgctggg caaggagctg cgccgtggcg cgaccgtctc cctggtctat ctctcggccg acgccaagcc gggcgccacg ggtctcgagt cgaccatgcg gttcatcctg tcggccaagt cggcctacgt cgacggtcag gtgttccgcg tcggcgccgc cgattcgact ccgcccgccg actgggacaa gccgctcgac ggcaaggtcg ccgtggtcac cggcgcggcc cgcggtatcg gcgcgacgat cgccgaggtg ttcgcgcgtg acggcgcgac cgtggtggcg atcgacgtcg acggtgcggc cgaggatctc aagcgcgtcg ccgacaaggt gggcggcacc gcactcacgc tcgacgtgac cgccgacgac gccgtcgaca agatcaccgc gcacgtcacc gaacaccatg gcggcaaggt cgacatcctc gtcaacaacg cgggtatcac gcgcgacaag ctgctcgcca acatggacga gaagcgctgg gacgcggtga tcgccgtcaa cctgctcgcg ccgcagcgcc tcaccgaagg cctggtgggc aacggaacca tcggcgaggg cggccgggtg atcggcctgt cgtcgatggc gggcatcgcg ggcaaccgcg gccagaccaa ttacgccacc accaaggccg ggatgatcgg gctggccgag gcgctggcgc ccgtgctggc cgacaagggc atcacgatca acgccgtcgc acccggcttc atcgagacca agatgaccga ggccatcccg ctcgccacgc gtgaggtggg caggcggctc aactcgctgt tccagggcgg ccagcccgtc gacgtggccg agttgatcgc gtacttcgcc agccccgcct cgaacgcggt gacgggcaac accatc
Expected Protein Sequence
MAHHHHHHMG TLEAQTQGPG SMVASDLFSQ VVNSGPGSFL AKQLGVPQPE TLRRYRPGDP PLAGSLLIGG SGRVAEPLRT ALADDYNLVS NNIGGRWADS FGGVVFDATG ITEAEGLKEL YTFFTPLLRN LAPCARVVVV GTTPAEAGSV HAQVVQRALE GFTRSLGKEL RRGATVSLVY LSADAKPGAT GLESTMRFIL SAKSAYVDGQ VFRVGAADST PPADWDKPLD GKVAVVTGAA RGIGATIAEV FARDGATVVA IDVDGAAEDL KRVADKVGGT ALTLDVTADD AVDKITAHVT EHHGGKVDIL VNNAGITRDK LLANMDEKRW DAVIAVNLLA PQRLTEGLVG NGTIGEGGRV IGLSSMAGIA GNRGQTNYAT TKAGMIGLAE ALAPVLADKG ITINAVAPGF IETKMTEAIP LATREVGRRL NSLFQGGQPV DVAELIAYFA SPASNAVTGN TIRVCGQAML GA
Full NT Sequence (Expression Vector + Insert)
ttcttgaaga cgaaagggcc tcgtgatacg cctattttta taggttaatg tcatgataat aatggtttct tagacgtcag gtggcacttt tcggggaaat gtgcgcggaa cccctatttg tttatttttc taaatacatt caaatatgta tccgctcatg agacaataac cctgataaat gcttcaataa tattgaaaaa ggaagagtat gagtattcaa catttccgtg tcgcccttat tccctttttt gcggcatttt gccttcctgt ttttgctcac ccagaaacgc tggtgaaagt aaaagatgct gaagatcagt tgggtgcacg agtgggttac atcgaactgg atctcaacag cggtaagatc cttgagagtt ttcgccccga agaacgtttt ccaatgatga gcacttttaa agttctgcta tgtggcgcgg tattatcccg tgttgacgcc gggcaagagc aactcggtcg ccgcatacac tattctcaga atgacttggt tgagtactca ccagtcacag aaaagcatct tacggatggc atgacagtaa gagaattatg cagtgctgcc ataaccatga gtgataacac tgcggccaac ttacttctga caacgatcgg aggaccgaag gagctaaccg cttttttgca caacatgggg gatcatgtaa ctcgccttga tcgttgggaa ccggagctga atgaagccat accaaacgac gagcgtgaca ccacgatgcc tgcagcaatg gcaacaacgt tgcgcaaact attaactggc gaactactta ctctagcttc ccggcaacaa ttaatagact ggatggaggc ggataaagtt gcaggaccac ttctgcgctc ggcccttccg gctggctggt ttattgctga taaatctgga gccggtgagc gtgggtctcg cggtatcatt gcagcactgg ggccagatgg taagccctcc cgtatcgtag ttatctacac gacggggagt caggcaacta tggatgaacg aaatagacag atcgctgaga taggtgcctc actgattaag cattggtaac tgtcagacca agtttactca tatatacttt agattgattt aaaacttcat ttttaattta aaaggatcta ggtgaagatc ctttttgata atctcatgac caaaatccct taacgtgagt tttcgttcca ctgagcgtca gaccccgtag aaaagatcaa aggatcttct tgagatcctt tttttctgcg cgtaatctgc tgcttgcaaa caaaaaaacc accgctacca gcggtggttt gtttgccgga tcaagagcta ccaactcttt ttccgaaggt aactggcttc agcagagcgc agataccaaa tactgtcctt ctagtgtagc cgtagttagg ccaccacttc aagaactctg tagcaccgcc tacatacctc gctctgctaa tcctgttacc agtggctgct gccagtggcg ataagtcgtg tcttaccggg ttggactcaa gacgatagtt accggataag gcgcagcggt cgggctgaac ggggggttcg tgcacacagc ccagcttgga gcgaacgacc tacaccgaac tgagatacct acagcgtgag ctatgagaaa gcgccacgct tcccgaaggg agaaaggcgg acaggtatcc ggtaagcggc agggtcggaa caggagagcg cacgagggag cttccagggg gaaacgcctg gtatctttat agtcctgtcg ggtttcgcca cctctgactt gagcgtcgat ttttgtgatg ctcgtcaggg gggcggagcc tatggaaaaa cgccagcaac gcggcctttt tacggttcct ggccttttgc tggccttttg ctcacatgtt ctttcctgcg ttatcccctg attctgtgga taaccgtatt accgcctttg agtgagctga taccgctcgc cgcagccgaa cgaccgagcg cagcgagtca gtgagcgagg aagcggaaga gcgcctgatg cggtattttc tccttacgca tctgtgcggt atttcacacc gcatatatgg tgcactctca gtacaatctg ctctgatgcc gcatagttaa gccagtatac actccgctat cgctacgtga ctgggtcatg gctgcgcccc gacacccgcc aacacccgct gacgcgccct gacgggcttg tctgctcccg gcatccgctt acagacaagc tgtgaccgtc tccgggagct gcatgtgtca gaggttttca ccgtcatcac cgaaacgcgc gaggcagctg cggtaaagct catcagcgtg gtcgtgaagc gattcacaga tgtctgcctg ttcatccgcg tccagctcgt tgagtttctc cagaagcgtt aatgtctggc ttctgataaa gcgggccatg ttaagggcgg ttttttcctg tttggtcact gatgcctccg tgtaaggggg atttctgttc atgggggtaa tgataccgat gaaacgagag aggatgctca cgatacgggt tactgatgat gaacatgccc ggttactgga acgttgtgag ggtaaacaac tggcggtatg gatgcggcgg gaccagagaa aaatcactca gggtcaatgc cagcgcttcg ttaatacaga tgtaggtgtt ccacagggta gccagcagca tcctgcgatg cagatccgga acataatggt gcagggcgct gacttccgcg tttccagact ttacgaaaca cggaaaccga agaccattca tgttgttgct caggtcgcag acgttttgca gcagcagtcg cttcacgttc gctcgcgtat cggtgattca ttctgctaac cagtaaggca accccgccag cctagccggg tcctcaacga caggagcacg atcatgcgca cccgtggcca ggacccaacg ctgcccgaga tgcgccgcgt gcggctgctg gagatggcgg acgcgatgga tatgttctgc caagggttgg tttgcgcatt cacagttctc cgcaagaatt gattggctcc aattcttgga gtggtgaatc cgttagcgag gtgccgccgg cttccattca ggtcgaggtg gcccggctcc atgcaccgcg acgcaacgcg gggaggcaga caaggtatag ggcggcgcct acaatccatg ccaacccgtt ccatgtgctc gccgaggcgg cataaatcgc cgtgacgatc agcggtccag tgatcgaagt taggctggta agagccgcga gcgatccttg aagctgtccc tgatggtcgt catctacctg cctggacagc atggcctgca acgcgggcat cccgatgccg ccggaagcga gaagaatcat aatggggaag gccatccagc ctcgcgtcgt gaacgccagc aagacgtagc ccagcgcgtc ggccgtaaca acaccattta aatggagtgg ttacaaatgg agtggttaat taacaacacc atttgtcgac gctctccctt atgcgactcc tgcattagga agcagcccag tagtaggttg aggccgttga gcaccgccgc cgcaaggaat ggtgcatgca aggagatggc gcccaacagt cccccggcca cggggcctgc caccataccc acgccgaaac aagcgctcat gagcccgaag tggcgagccc gatcttcccc atcggtgatg tcggcgatat aggcgccagc aaccgcacct gtggcgccgg tgatgccggc cacgatgcgt ccggcgtaga ggatcgagat ctcgatcccg cgaaattaat acgactcact atagggagac cacaacggtt tccctctaga aataattttg tttaacttta agaaggagat ataccatggc tcatcaccat caccatcata tgggtaccct ggaagctcag acccagggtc ctggttcgat ggtggcttcg gacctgtttt cccaagtggt caattccggg ccgggatcgt tcctggccaa gcagctgggc gtgccgcagc ccgagacgtt gcgccgctac cgccccggtg acccgccgct ggcgggctcg ctgctgatcg gcggatccgg ccgcgtggcc gaacccctgc gcaccgcatt ggccgacgac tacaacctgg tgtccaacaa catcggtggc cggtgggccg attcgttcgg cggcgtggtg ttcgacgcca cgggcatcac cgaggccgag ggcctcaagg agctctacac gttcttcacg ccgctgctgc gcaacctcgc gccgtgtgcg cgggtggtcg tcgtcggcac cacgcccgcg gaggccggca gcgtccacgc acaggtggtg cagcgggcgc tggaaggttt cacgcgctcg ctgggcaagg agctgcgccg tggcgcgacc gtctccctgg tctatctctc ggccgacgcc aagccgggcg ccacgggtct cgagtcgacc atgcggttca tcctgtcggc caagtcggcc tacgtcgacg gtcaggtgtt ccgcgtcggc gccgccgatt cgactccgcc cgccgactgg gacaagccgc tcgacggcaa ggtcgccgtg gtcaccggcg cggcccgcgg tatcggcgcg acgatcgccg aggtgttcgc gcgtgacggc gcgaccgtgg tggcgatcga cgtcgacggt gcggccgagg atctcaagcg cgtcgccgac aaggtgggcg gcaccgcact cacgctcgac gtgaccgccg acgacgccgt cgacaagatc accgcgcacg tcaccgaaca ccatggcggc aaggtcgaca tcctcgtcaa caacgcgggt atcacgcgcg acaagctgct cgccaacatg gacgagaagc gctgggacgc ggtgatcgcc gtcaacctgc tcgcgccgca gcgcctcacc gaaggcctgg tgggcaacgg aaccatcggc gagggcggcc gggtgatcgg cctgtcgtcg atggcgggca tcgcgggcaa ccgcggccag accaattacg ccaccaccaa ggccgggatg atcgggctgg ccgaggcgct ggcgcccgtg ctggccgaca agggcatcac gatcaacgcc gtcgcacccg gcttcatcga gaccaagatg accgaggcca tcccgctcgc cacgcgtgag gtgggcaggc ggctcaactc gctgttccag ggcggccagc ccgtcgacgt ggccgagttg atcgcgtact tcgccagccc cgcctcgaac gcggtgacgg gcaacaccat ccgcgtgtgc ggccaggcga tgctgggggc gaaacagcac gaacaagttc tgcagccaag cttctcgagg atccggctgc taacaaagcc cgaaaggaag ctgagttggc tgctgccacc gctgagcaat aactagcata accccttggg gcctctaaac gggtcttgag gggttttttg ctgaaaggag gaactatatc cggatatcca caggacgggt gtggtcgcca tgatcgcgta gtcgatagtg gctccaagta gcgaagcgag caggactggg cggcggccaa agcggtcgga cagtgctccg agaacgggtg cgcatagaaa ttgcatcaac gcatatagcg ctagcagcac gccatagtga ctggcgatgc tgtcggaatg gacgatatcc cgcaagaggc ccggcagtac cggcataacc aagcctatgc ctacagcatc cagggtgacg gtgccgagga tgacgatgag cgcattgtta gatttcatac acggtgcctg actgcgttag caatttaact gtgataaact accgcattaa agcttatcga tgataagctg tcaaacatga gaa