MymaA.00495.a
Cytidine deaminase
CENTER ID:
MymaA.00495.a
ORGANISM:
Mycobacterium marinum ATCC BAA-535 / M
ASSOCIATED DISEASE:
Cutaneous ulcerations, deep abscesses
CURRENT STATUS:
in PDB
COMMUNITY REQUEST:
False
NIH RISK GROUP:
2
SELECT AGENT:
False
NIH PRIORITY
pathogens category:
IIIC
Ordering Clones & Proteins
If there are materials available for this target, they will be listed below.
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Clones*
CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO
AA
START
AA
STOP
ORDER
MATERIAL
MymaA.00495.a.A1.GE30033
Full length( MymaA.00495.a )
info
1
132
MymaA.00495.a.A1.GE30033
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis . Get sequence information
using the button in the "info" column.
Proteins
CENTER REFERENCE ID
DOMAIN/REGION DESCRIPTION
INFO
AA START
AA STOP
ORDER MATERIAL
MymaA.00495.a.A1.PS00823
Full length( MymaA.00495.a )
info
1
132
PS00823
MymaA.00495.a.A1.PS00824
Full length( MymaA.00495.a )
info
1
132
PS00824
Structures
4F3W
DEPOSITED: 5/9/2012
DETERMINATION: XRay
CLONE: MymaA.00495.a.A1.GE30033
PROTEIN: MymaA.00495.a.A1.PS00823
Publications by SSGCID
Increasing the structural coverage of tuberculosis drug targets.
Abendroth J, Abramov A, Armour B, Barrett LK, Baugh L, Begley DW, Buchko GW, Choi R, Clifton MC, Dieterich SH, Dranow DM, Edwards TE, Fairman JW, Ferrell M, Fox D, Gardberg AS, Hewitt SN, Lorimer D, Lyons-Abbott S, Mundt E, Muruthi MM, Myers J, Myler PJ, Napuli AJ, Phan I, Sekar A, Serbzhinskiy D, Stacy R, Staker BL, Stewart LJ, Taylor BM, Thompkins K, Tran N, Van Voorhis WC, Zhang Y
Tuberculosis (Edinb) - 2014
volume 95, issue 2, pages 142-8
PDB:
3GVC ,
3GVG ,
3GWC ,
3H7F ,
3H81 ,
3HE2 ,
3HWI ,
3HWK ,
3HZG ,
3ICO ,
3KHP ,
3LLS ,
3MOY ,
3MPZ ,
3MYB ,
3NDN ,
3NDO ,
3NF4 ,
3NG3 ,
3NJD ,
3NWO ,
3O0M ,
3O38 ,
3OC6 ,
3OC7 ,
3OEC ,
3OI9 ,
3OKS ,
3OL3 ,
3OL4 ,
3OME ,
3P0T ,
3P2Y ,
3P4I ,
3P4T ,
3P5M ,
3P85 ,
3PE8 ,
3PGX ,
3PK0 ,
3PPI ,
3PXX ,
3PZY ,
3Q1T ,
3Q8N ,
3QBP ,
3QDF ,
3QH4 ,
3QHA ,
3QIV ,
3QK8 ,
3QKA ,
3QLJ ,
3QMJ ,
3QRE ,
3QUA ,
3QUV ,
3QXI ,
3QXZ ,
3QYR ,
3R0O ,
3R1I ,
3R1J ,
3R20 ,
3R2N ,
3R4T ,
3R6H ,
3R6O ,
3R7K ,
3R8C ,
3R9P ,
3R9Q ,
3R9R ,
3R9S ,
3R9T ,
3RD5 ,
3RD7 ,
3RD8 ,
3RFQ ,
3RIH ,
3RR2 ,
3RR6 ,
3RRP ,
3RRV ,
3RSI ,
3RV2 ,
3S55 ,
3S82 ,
3SBX ,
3SF6 ,
3SLL ,
3SVK ,
3SVT ,
3SWO ,
3SWT ,
3SWX ,
3SX2 ,
3T3W ,
3T7C ,
3TAV ,
3TCR ,
3TDE ,
3TJR ,
3TL3 ,
3TLF ,
3TRR ,
3TSC ,
3TX2 ,
3TZQ ,
3TZU ,
3U0A ,
3U0B ,
3UCX ,
3UVE ,
4DI1 ,
4DIE ,
4DQ8 ,
4DXL ,
4ED4 ,
4EGE ,
4EGF ,
4EMD ,
4EO9 ,
4EYE ,
4F3W ,
4F47 ,
4FFC ,
4GK6 ,
4HDT ,
4HR3 ,
4I1Y ,
4IJN ,
4IV6 ,
4IZ9 ,
4J5I ,
4KAM ,
4LGV ,
4O2D ,
5EJ2
Sequences
These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols.
To find the specific sequence of any material you may have ordered, click on the "info" button next to the name of that material.
AA Sequence
MPDIDWKQLR DKATQVAAGA YAPYSRFPVG AAALVDDGRV VTGCNVENVS YGLALCAECG VVCALHATGG GRLVALACVD GRGAPLMPCG RCRQLLFEHG GPELLVDHLA GPRRLGDLLP EPFHADLTGE PT
NT Sequence
ATGCCCGATA TTGATTGGAA ACAATTGCGC GACAAAGCAA CCCAGGTTGC GGCCGGGGCT TATGCACCCT ATTCGCGGTT CCCGGTCGGT GCCGCCGCGC TGGTCGACGA CGGCAGGGTC GTTACCGGGT GCAATGTGGA AAATGTCTCA TACGGGCTGG CCCTGTGCGC GGAATGCGGT GTGGTGTGCG CCCTGCATGC CACGGGTGGG GGTCGGCTGG TCGCGCTGGC GTGTGTCGAC GGCCGCGGAG CACCGCTGAT GCCGTGCGGC CGGTGTCGCC AGCTGTTGTT CGAGCACGGC GGCCCGGAGC TGCTCGTCGA CCATCTCGCC GGGCCTCGCC GGCTCGGCGA TCTGCTGCCC GAACCTTTCC ACGCCGACCT CACCGGGGAA CCAACT
Details for MymaA.00495.a.A1.GE30033
HARVESTED ON:
8/10/2010
SEQUENCED ON:
8/16/2010
EXPECTED MW:
15kDa
OBSERVED MW:
16kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Many (50-100)
TOTAL EXPRESSION LEVEL:
Low Expression
SOLUBLE EXPRESSION LEVEL
High Expression
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
pass
PERCENT IDENTITY:
100
PERCENT COVERAGE:
100
Details for MymaA.00495.a.A1.PS00823
PURIFICATION DATe:
10/27/2010
CONCENTRATION:
100.89mg/ml
OBSERVED MW:
data unavailable
EXPRESSION LEVEL:
High Expression
PROTEIN PURIFICATION BUFFER:
20 mM HEPES, pH 7.0, 300 mM NaCl, 5% glycerol and 1 mM TCEP
EXPRESSION HOST:
data unavailable
VIAL COUNT (approx.):
2
VIAL VOLUME:
200µl
PERCENT IDENTITY:
100
PERCENT COVERAGE:
100
Details for MymaA.00495.a.A1.PS00824
PURIFICATION DATe:
10/27/2010
CONCENTRATION:
12.72mg/ml
OBSERVED MW:
data unavailable
EXPRESSION LEVEL:
High Expression
PROTEIN PURIFICATION BUFFER:
20 mM HEPES, pH 7.0, 300 mM NaCl, 5% glycerol and 1 mM TCEP
EXPRESSION HOST:
data unavailable
VIAL COUNT (approx.):
2
VIAL VOLUME:
200µl
PERCENT IDENTITY:
100
PERCENT COVERAGE:
100