HevcA.17238.a

Genome polyprotein

CENTER ID: HevcA.17238.a
ORGANISM: Hepacivirus Hepatitis C virus genotype 1a (isolate H)
ASSOCIATED DISEASE: Fibrosis or cirrhosis of liver
CURRENT STATUS: purified
COMMUNITY REQUEST: True
NIH RISK GROUP: 2
SELECT AGENT: False
NIH PRIORITY
pathogens category:
I

Ordering Clones & Proteins

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External Resources
RESOURCE REFERENCE ID
UniProt: P27958
ViPR: link
ViPR: link
ViPR: link
ViPR: link
ViPR: link
ViPR: link
Sequences
These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "info" button next to the name of that material.
AA Sequence
MSTNPKPQRK TKRNTNRRPQ DVKFPGGGQI VGGVYLLPRR GPRLGVRATR KTSERSQPRG RRQPIPKARR PEGRTWAQPG YPWPLYGNEG CGWAGWLLSP RGSRPSWGPT DPRRRSRNLG KVIDTLTCGF ADLMGYIPLV GAPLGGAARA LAHGVRVLED GVNYATGNLP GCSFSIFLLA LLSCLTVPAS AYQVRNSSGL YHVTNDCPNS SVVYEAADAI LHTPGCVPCV REGNASRCWV AVTPTVATRD GKLPTTQLRR HIDLLVGSAT LCSALYVGDL CGSVFLVGQL FTFSPRHHWT TQDCNCSIYP GHITGHRMAW NMMMNWSPTA ALVVAQLLRI PQAIMDMIAG AHWGVLAGIK YFSMVGNWAK VLVVLLLFAG VDAETHVTGG NAGRTTAGLV GLLTPGAKQN IQLINTNGSW HINSTALNCN ESLNTGWLAG LFYQHKFNSS GCPERLASCR RLTDFAQGWG PISYANGSGL DERPYCWHYP PRPCGIVPAK SVCGPVYCFT PSPVVVGTTD RSGAPTYSWG ANDTDVFVLN NTRPPLGNWF GCTWMNSTGF TKVCGAPPCV IGGVGNNTLL CPTDCFRKYP EATYSRCGSG PRITPRCMVD YPYRLWHYPC TINYTIFKVR MYVGGVEHRL EAACNWTRGE RCDLEDRDRS ELSPLLLSTT QWQVLPCSFT TLPALSTGLI HLHQNIVDVQ YLYGVGSSIA SWAIKWEYVV LLFLLLADAR VCSCLWMMLL ISQAEAALEN LVILNAASLA GTHGLVSFLV FFCFAWYLKG RWVPGAVYAL YGMWPLLLLL LALPQRAYAL DTEVAASCGG VVLVGLMALT LSPYYKRYIS WCMWWLQYFL TRVEAQLHVW VPPLNVRGGR DAVILLTCVV HPALVFDITK LLLAIFGPLW ILQASLLKVP YFVRVQGLLR ICALARKIAG GHYVQMAIIK LGALTGTCVY NHLAPLRDWA HNGLRDLAVA VEPVVFSRME TKLITWGADT AACGDIINGL PVSARRGQEI LLGPADGMVS KGWRLLAPIT AYAQQTRGLL GCIITSLTGR DKNQVEGEVQ IVSTATQTFL ATCINGVCWT VYHGAGTRTI ASPKGPVIQT YTNVDQDLVG WPAPQGSRSL TPCTCGSSDL YLVTRHADVI PVRRRGDSRG SLLSPRPISY LKGSSGGPLL CPTGHAVGLF RAAVCTRGVA KAVDFIPVEN LETTMRSPVF TDNSSPPAVP QSFQVAHLHA PTGSGKSTKV PAAYAAKGYK VLVLNPSVAA TLGFGAYMSK AHGVDPNIRT GVRTITTGSP ITYSTYGKFL ADAGCSGGAY DIIICDECHS TDATSISGIG TVLDQAETAG ARLVVLATAT PPGSVTVSHP NIEEVALSTT GEIPFYGKAI PLEVIKGGRH LIFCHSKKKC DELAAKLVAL GINAVAYYRG LDVSVIPTSG DVVVVSTDAL MTGFTGDFDS VIDCNTCVTQ TVDFSLDPTF TIETTTLPQD AVSRTQRRGR TGRGKPGIYR FVAPGERPSG MFDSSVLCEC YDAGCAWYEL TPAETTVRLR AYMNTPGLPV CQDHLGFWEG VFTGLTHIDA HFLSQTKQSG ENFPYLVAYQ ATVCARAQAP PPSWDQMRKC LIRLKPTLHG PTPLLYRLGA VQNEVTLTHP ITKYIMTCMS ADLEVVTSTW VLVGGVLAAL AAYCLSTGCV VIVGRIVLSG KPAIIPDREV LYQEFDEMEE CSQHLPYIEQ GMMLAEQFKQ KALGLLQTAS RHAEVITPAV QTNWQKLEVF WAKHMWNFIS GIQYLAGLST LPGNPAIASL MAFTAAVTSP LTTGQTLLFN ILGGWVAAQL AAPGAATAFV GAGLAGAALD SVGLGKVLVD ILAGYGAGVA GALVAFKIMS GEVPSTEDLV NLLPAILSPG ALAVGVVFAS ILRRRVGPGE GAVQWMNRLI AFASRGNHVS PTHYVPESDA AARVTAILSS LTVTQLLRRL HQWISSECTT PCSGSWLRDI WDWICEVLSD FKTWLKAKLM PQLPGIPFVS CQRGYRGVWR GDGIMHTRCH CGAEITGHVK NGTMRIVGPR TCKNMWSGTF FINAYTTGPC TPLPAPNYKF ALWRVSAEEY VEIRRVGDFH YVSGMTTDNL KCPCQIPSPE FFTELDGVRL HRFAPPCKPL LREEVSFRVG LHEYPVGSQL PCEPEPDVAV LTSMLTDPSH ITAEAAGRRL ARGSPPSMAS SSASQLSAPS LKATCTANHD SPDAELIEAN LLWRQEMGGN ITRVESENKV VILDSFDPLV AEEDEREVSV PAEILRKSRR FAPALPVWAR PDYNPLLVET WKKPDYEPPV VHGCPLPPPR SPPVPPPRKK RTVVLTESTL PTALAELATK SFGSSSTSGI TGDNTTTSSE PAPSGCPPDS DVESYSSMPP LEGEPGDPDL SDGSWSTVSS GADTEDVVCC SMSYSWTGAL VTPCAAEEQK LPINALSNSL LRHHNLVYST TSRSACQRKK KVTFDRLQVL DSHYQDVLKE VKAAASKVKA NLLSVEEACS LAPPHSAKSK FGYGAKDVRC HARKAVAHIN SVWKDLLEDS VTPIDTTIMA KNEVFCVQPE KGGRKPARLI VFPDLGVRVC EKMALYDVVS KLPLAVMGSS YGFQYSPGQR VEFLVQAWKS KKTPMGLSYD TRCFDSTVTE SDIRTEEAIY QCCDLDPQAR VAIKSLTERL YVGGPLTNSR GENCGYRRCR ASRVLTTSCG NTLTRYIKAR AACRAAGLQD CTMLVCGDDL VVICESAGVQ EDAASLRAFT EAMTRYSAPP GDPPQPEYDL ELITSCSSNV SVAHDGAGKR VYYLTRDPTT PLARAAWETA RHTPVNSWLG NIIMFAPTLW ARMILMTHFF SVLIARDQLE QALNCEIYGA CYSIEPLDLP PIIQRLHGLS AFSLHSYSPG EINRVAACLR KLGVPPLRAW RHRAWSVRAR LLARGGKAAI CGKYLFNWAV RTKLKLTPIT AAGRLDLSGW FTAGYSGGDI YHSVSHARPR WFWFCLLLLA AGVGIYLLPN R
NT Sequence
gccagccccc tgatgggggc gacactccac catgaatcac tcccctgtga ggaactactg tcttcacgca gaaagcgtct agccatggcg ttagtatgag tgtcgtgcag cctccaggac cccccctccc gggagagcca tagtggtctg cggaaccggt gagtacaccg gaattgccag gacgaccggg tcctttcttg gataaacccg ctcaatgcct ggagatttgg gcgtgccccc gcaagactgc tagccgagta gtgttgggtc gcgaaaggcc ttgtggtact gcctgatagg gtgcttgcga gtgccccggg aggtctcgta gaccgtgcac catgagcacg aatcctaaac ctcaaagaaa aaccaaacgt aacaccaacc gtcgcccaca ggacgtcaag ttcccgggtg gcggtcagat cgttggtgga gtttacttgt tgccgcgcag gggccctaga ttgggtgtgc gcgcgacgag gaagacttcc gagcggtcgc aacctcgagg tagacgtcag cctatcccca aggcacgtcg gcccgagggc aggacctggg ctcagcccgg gtacccttgg cccctctatg gcaatgaggg ttgcgggtgg gcgggatggc tcctgtctcc ccgtggctct cggcctagct ggggccccac agacccccgg cgtaggtcgc gcaatttggg taaggtcatc gataccctta cgtgcggctt cgccgacctc atggggtaca taccgctcgt cggcgcccct cttggaggcg ctgccagggc cctggcgcat ggcgtccggg ttctggaaga cggcgtgaac tatgcaacag ggaaccttcc tggttgctct ttctctatct tccttctggc cctgctctct tgcctgactg tgcccgcttc agcctaccaa gtgcgcaatt cctcggggct ttaccatgtc accaatgatt gccctaactc gagtattgtg tacgaggcgg ccgatgccat cctgcacact ccggggtgtg tcccttgcgt tcgcgagggt aacgcctcga ggtgttgggt ggcggtgacc cccacggtgg ccaccaggga cggcaaactc cccacaacgc agcttcgacg tcatatcgat ctgcttgtcg ggagcgccac cctctgctcg gccctctacg tgggggacct gtgcgggtct gtctttcttg ttggtcaact gtttaccttc tctcccaggc gccactggac gacgcaagac tgcaattgtt ctatctatcc cggccatata acgggtcatc gcatggcatg ggatatgatg atgaactggt cccctacggc agcgttggtg gtagctcagc tgctccggat cccacaagcc atcatggaca tgatcgctgg tgctcactgg ggagtcctgg cgggcatagc gtatttctcc atggtgggga actgggcgaa ggtcctggta gtgctgctgc tatttgccgg cgtcgacgcg gaaacccacg tcaccggggg aagtgccggc cgcaccacgg ctgggcttgt tggtctcctt acaccaggcg ccaagcagaa catccaactg atcaacacca acggcagttg gcacatcaat agcacggcct tgaactgcaa tgaaagcctt aacaccggct ggttagcagg gctcttctat cagcacaaat tcaactcttc aggctgtcct gagaggttgg ccagctgccg acgccttacc gattttgccc agggctgggg tcctatcagt tatgccaacg gaagcggcct cgacgaacgc ccctactgct ggcactaccc tccaagacct tgtggcattg tgcccgcaaa gagcgtgtgt ggcccggtat attgcttcac tcccagcccc gtggtggtgg gaacgaccga caggtcgggc gcgcctacct acagctgggg tgcaaatgat acggatgtct tcgtccttaa caacaccagg ccaccgctgg gcaattggtt cggttgtacc tggatgaact caactggatt caccaaagtg tgcggagcgc ccccttgtgt catcggaggg gtgggcaaca acaccttgct ctgccccact gattgtttcc gcaagcatcc ggaagccaca tactctcggt gcggctccgg tccctggatt acacccaggt gcatggtcga ctacccgtat aggctttggc actatccttg taccatcaat tacaccatat tcaaagtcag gatgtacgtg ggaggggtcg agcacaggct ggaagcggcc tgcaactgga cgcggggcga acgctgtgat ctggaagaca gggacaggtc cgagctcagc ccattgctgc tgtccaccac acagtggcag gtccttccgt gttctttcac gaccctgcca gccttgtcca ccggcctcat ccacctccac cagaacattg tggacgtgca gtacttgtac ggggtagggt caagcatcgc gtcctgggcc attaagtggg agtacgtcgt tctcctgttc ctcctgcttg cagacgcgcg cgtctgctcc tgcttgtgga tgatgttact catatcccaa gcggaggcgg ctttggagaa cctcgtaata ctcaatgcag catccctggc cgggacgcac ggtcttgtgt ccttcctcgt gttcttctgc tttgcgtggt atctgaaggg taggtgggtg cccggagcgg tctacgcctt ctacgggatg tggcctctcc tcctgctcct gctggcgttg cctcagcggg catacgcact ggacacggag gtggccgcgt cgtgtggcgg cgttgttctt gtcgggttaa tggcgctgac tctgtcgcca tattacaagc gctacatcag ctggtgcatg tggtggcttc agtattttct gaccagagta gaagcgcaac tgcacgtgtg ggttcccccc ctcaacgtcc ggggggggcg cgatgccgtc atcttactca tgtgtgttgt acacccgact ctggtatttg acatcaccaa actactcctg gccatcttcg gacccctttg gattcttcaa gccagtttgc ttaaagtccc ctacttcgtg cgcgttcaag gccttctccg gatctgcgcg ctagcgcgga agatagccgg aggtcattac gtgcaaatgg ccatcatcaa gttaggggcg cttactggca cctatgtgta taaccatctc acccctcttc gagactgggc gcacaacggc ctgcgagatc tggccgtggc tgtggaacca gtcgtcttct cccgaatgga gaccaagctc atcacgtggg gggcagatac cgccgcgtgc ggtgacatca tcaacggctt gcccgtctct gcccgtaggg gccaggagat actgcttggg ccagccgacg gaatggtctc caaggggtgg aggttgctgg cgcccatcac ggcgtacgcc cagcagacga gaggcctcct agggtgtata atcaccagcc tgactggccg ggacaaaaac caagtggagg gtgaggtcca gatcgtgtca actgctaccc aaaccttcct ggcaacgtgc atcaatgggg tatgctggac tgtctaccac ggggccggaa cgaggaccat cgcatcaccc aagggtcctg tcatccagat gtataccaat gtggaccaag accttgtggg ctggcccgct cctcaaggtt cccgctcatt gacaccctgc acctgcggct cctcggacct ttacctggtc acgaggcacg ccgatgtcat tcccgtgcgc cggcgaggtg atagcagggg tagcctgctt tcgccccggc ccatttccta cttgaaaggc tcctcggggg gtccgctgtt gtgccccgcg ggacacgccg tgggcctatt cagggccgcg gtgtgcaccc gtggagtggc taaggcggtg gactttatcc ctgtggagaa cctagagaca accatgagat ccccggtgtt cacggacaac tcctctccac cagcagtgcc ccagagcttc caggtggccc acctgcatgc tcccaccggc agcggtaaga gcaccaaggt cccggctgcg tacgcagccc agggctacaa ggtgttggtg ctcaacccct ctgttgctgc aacgctgggc tttggtgctt acatgtccaa ggcccatggg gttgatccta atatcaggac cggggtgaga acaattacca ctggcagccc catcacgtac tccacctacg gcaagttcct tgccgacggc gggtgctcag gaggtgctta tgacataata atttgtgacg agtgccactc cacggatgcc acatccatct tgggcatcgg cactgtcctt gaccaagcag agactgcggg ggcgagactg gttgtgctcg ccactgctac ccctccgggc tccgtcactg tgtcccatcc taacatcgag gaggttgctc tgtccaccac cggagagatc cctttttacg gcaaggctat ccccctcgag gtgatcaagg ggggaagaca tctcatcttc tgccactcaa agaagaagtg cgacgagctc gccgcgaagc tggtcgcatt gggcatcaat gccgtggcct actaccgcgg tcttgacgtg tctgtcatcc cgaccagcgg cgatgttgtc gtcgtgtcga ccgatgctct catgactggc tttaccggcg acttcgactc tgtgatagac tgcaacacgt gtgtcactca gacagtcgat ttcagccttg accctacctt taccattgag acaaccacgc tcccccagga tgctgtctcc aggactcaac gccggggcag gactggcagg gggaagccag gcatctacag atttgtggca ccgggggagc gcccctccgg catgttcgac tcgtccgtcc tctgtgagtg ctatgacgcg ggctgtgctt ggtatgagct cacgcccgcc gagactacag ttaggctacg agcgtacatg aacaccccgg ggcttcccgt gtgccaggac catcttgaat tttgggaggg cgtctttacg ggcctcactc atatagatgc ccactttcta tcccagacaa agcagagtgg ggagaacttt ccttacctgg tagcgtacca agccaccgtg tgcgctaggg ctcaagcccc tcccccatcg tgggaccaga tgtggaagtg tttgatccgc cttaaaccca ccctccatgg gccaacaccc ctgctataca gactgggcgc tgttcagaat gaagtcaccc tgacgcaccc aatcaccaaa tacatcatga catgcatgtc ggccgacctg gaggtcgtca cgagcacctg ggtgctcgtt ggcggcgtcc tggctgctct ggccgcgtat tgcctgtcaa caggctgcgt ggtcatagtg ggcaggattg tcttgtccgg gaagccggca attatacctg acagggaggt tctctaccag gagttcgatg agatggaaga gtgctctcag cacttaccgt acatcgagca agggatgatg ctcgctgagc agttcaagca gaaggccctc ggcctcctgc agaccgcgtc ccgccaagca gaggttatca cccctgctgt ccagaccaac tggcagaaac tcgaggtctt ctgggcgaag cacatgtgga atttcatcag tgggatacaa tacttggcgg gcctgtcaac gctgcctggt aaccccgcca ttgcttcatt gatggctttt acagctgccg tcaccagccc actaaccact ggccaaaccc tcctcttcaa catattgggg gggtgggtgg ctgcccagct cgccgccccc ggtgccgcta ccgcctttgt gggcgctggc ttagctggcg ccgccatcgg cagcgttgga ctggggaagg tcctcgtgga cattcttgca gggtatggcg cgggcgtggc gggagctctt gtagcattca agatcatgag cggtgaggtc ccctccacgg aggacctggt caatctgctg cccgccatcc tctcgcctgg agcccttgta gtcggtgtgg tctgcgcagc aatactgcgc cggcacgttg gcccgggcga gggggcagtg caatggatga accggctaat agccttcgcc tcccggggga accatgtttc ccccacgcac tacgtgccgg agagcgatgc agccgcccgc gtcactgcca tactcagcag cctcactgta acccagctcc tgaggcgact gcatcagtgg ataagctcgg agtgtaccac tccatgctcc ggttcctggc taagggacat ctgggactgg atatgcgagg tgctgagcga ctttaagacc tggctgaaag ccaagctcat gccacaactg cctgggattc cctttgtgtc ctgccagcgc gggtataggg gggtctggcg aggagacggc attatgcaca ctcgctgcca ctgtggagct gagatcactg gacatgtcaa aaacgggacg atgaggatcg tcggtcctag gacctgcagg aacatgtgga gtgggacgtt ccccattaac gcctacacca cgggcccctg tactcccctt cctgcgccga actataagtt cgcgctgtgg agggtgtctg cagaggaata cgtggagata aggcgggtgg gggacttcca ctacgtatcg ggtatgacta ctgacaatct taaatgcccg tgccagatcc catcgcccga atttttcaca gaattggacg gggtgcgcct acataggttt gcgccccctt gcaagccctt gctgcgggag gaggtatcat tcagagtagg actccacgag tacccggtgg ggtcgcaatt accttgcgag cccgaaccgg acgtagccgt gttgacgtcc atgctcactg atccctccca tataacagca gaggcggccg ggagaaggtt ggcgagaggg tcaccccctt ctatggccag ctcctcggcc agccagctgt ccgctccatc tctcaaggca acttgcaccg ccaaccatga ctcccctgac gccgagctca tagaggctaa cctcctgtgg aggcaggaga tgggcggcaa catcaccagg gttgagtcag agaacaaagt ggtgattctg gactccttcg atccgcttgt ggcagaggag gatgagcggg aggtctccgt acccgcagaa attctgcgga agtctcggag attcgcccgg gccctgcccg tttgggcgcg gccggactac aaccccccgc tagtagagac gtggaaaaag cctgactacg aaccacctgt ggtccatggc tgcccgctac cacctccacg gtcccctcct gtgcctccgc ctcggaaaaa gcgtacggtg gtcctcaccg aatcaaccct atctactgcc ttggccgagc ttgccaccaa aagttttggc agctcctcaa cttccggcat tacgggcgac aatacgacaa catcctctga gcccgcccct tctggctgcc cccccgactc cgacgttgag tcctattctt ccatgccccc cctggagggg gagcctgggg atccggatct cagcgacggg tcatggtcga cggtcagtag tggggccgac acggaagatg tcgtgtgctg ctcaatgtct tattcctgga caggcgcact cgtcaccccg tgcgctgcgg aagaacaaaa actgcccatc aacgcactga gcaactcgtt gctacgccat cacaatctgg tgtattccac cacttcacgc agtgcttgcc aaaggcagaa gaaagtcaca tttgacagac tgcaagttct ggacagccat taccaggacg tgctcaagga ggtcaaagca gcggcgtcaa aagtgaaggc taacttgcta tccgtagagg aagcttgcag cctgacgccc ccacattcag ccaaatccaa gtttggctat ggggcaaaag acgtccgttg ccatgccaga aaggccgtag cccacatcaa ctccgtgtgg aaagaccttc tggaagacag tgtaacacca atagacacta ccatcatggc caagaacgag gttttctgcg ttcagcctga gaaggggggt cgtaagccag ctcgtctcat cgtgttcccc gacctgggcg tgcgcgtgtg cgagaagatg gccctgtacg acgtggttag caagctcccc ctggccgtga tgggaagctc ctacggattc caatactcac caggacagcg ggttgaattc ctcgtgcaag cgtggaagtc caagaagacc ccgatggggt tctcgtatga tacccgctgt tttgactcca cagtcactga gagcgacatc cgtacggagg aggcaattta ccaatgttgt gacctggacc cccaagcccg cgtggccatc aagtccctca ctgagaggct ttatgttggg ggccctctta ccaattcaag gggggaaaac tgcggctacc gcaggtgccg cgcgagcggc gtactgacaa ctagctgtgg taacaccctc acttgctaca tcaaggcccg ggcagcctgt cgagccgcag ggctccagga ctgcaccatg ctcgtgtgtg gcgacgactt agtcgttatc tgtgaaagtg cgggggtcca ggaggacgcg gcgagcctga gagccttcac ggaggctatg accaggtact ccgccccccc cggggacccc ccacaaccag aatacgactt ggagcttata acatcatgct cctccaacgt gtcagtcgcc cacgacggcg ctggaaagag ggtctactac cttacccgtg accctacaac ccccctcgcg agagccgcgt gggagacagc aagacacact ccagtcaatt cctggctagg caacataatc atgtttgccc ccacactgtg ggcgaggatg atactgatga cccatttctt tagcgtcctc atagccaggg atcagcttga acaggctctt aactgtgaga tctacggagc ctgctactcc atagaaccac tggatctacc tccaatcatt caaagactcc atggcctcag cgcattttca ctccacagtt actctccagg tgaaatcaat agggtggccg catgcctcag aaaacttggg gtcccgccct tgcgagcttg gagacaccgg gcccggagcg tccgcgctag gcttctgtcc agaggaggca gggctgccat atgtggcaag tacctcttca actgggcagt aagaacaaag ctcaaactca ctccaatagc ggccgctggc cggctggact tgtccggttg gttcacggct ggctacagcg ggggagacat ttatcacagc gtgtctcatg cccggccccg ctggttctgg ttttgcctac tcctgctcgc tgcaggggta ggcatctacc tcctccccaa ccgatgaagg ttggggtaaa cactccggcc tcttaggcca tttcctgttt tttttttttt tttttttttt tttttttttt tttttttttt ttttttttct tttttttttt ttttttcctt tttttttttt ttttttttct ttccttcttt tttcctttct tttccttcct tctttaatgg tggctccatc ttagccctag tcacggctag ctgtgaaagg tccgtgagcc gcatgactgc agagagtgct gatactggcc tctctgcaga tcatgt