BuxeA.00119.a
D-alanine--D-alanine ligase
CENTER ID:
BuxeA.00119.a
ORGANISM:
Burkholderia xenovorans LB400
ASSOCIATED DISEASE:
CURRENT STATUS:
in PDB
COMMUNITY REQUEST:
True
NIH RISK GROUP:
3
SELECT AGENT:
False
NIH PRIORITY
pathogens category:
IIIB
Ordering Clones & Proteins
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Clones*
CENTER REFERENCE ID
DOMAIN/REGION DESCRIPTION
INFO
AA START
AA STOP
ORDER MATERIAL
BuxeA.00119.a.A1.GE33029
Full length( BuxeA.00119.a )
info
1
313
BuxeA.00119.a.A1.GE33029
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis . Get sequence information
using the button in the "info" column.
Proteins
CENTER REFERENCE ID
DOMAIN/REGION DESCRIPTION
INFO
AA START
AA STOP
ORDER MATERIAL
BuxeA.00119.a.A1.PS01358
Full length( BuxeA.00119.a )
info
1
313
PS01358
Structures
4EGJ
DEPOSITED: 3/31/2012
DETERMINATION: XRay
CLONE: BuxeA.00119.a.A1.GE33029
PROTEIN: BuxeA.00119.a.A1.PS01358
Publications by SSGCID
Combining functional and structural genomics to sample the essential Burkholderia structome.
Abendroth J, Armour B, Barrett L, Baugh L, Begley DW, Buchko GW, Choi R, Clifton MC, Dieterich SH, Dranow DM, Edwards TE, Fairman JW, Fox D, Gallagher LA, Gardberg AS, Gillespie A, Manoil C, Myler PJ, Nakazawa-Hewitt S, Napuli A, Nguyen MT, Patrapuvich R, Phan I, Stacy R, Staker BL, Stewart LJ, Van Voorhis WC
PLoS ONE - 2012
volume 8, issue 1, pages e53851
PDB:
3D63 ,
3DAH ,
3EIZ ,
3EJ2 ,
3EK2 ,
3EZO ,
3F0F ,
3FTP ,
3GK0 ,
3GK3 ,
3GVF ,
3GWA ,
3GWE ,
3IML ,
3SZ8 ,
3T4C ,
3TML ,
3TMQ ,
3TXY ,
3U7J ,
3UE9 ,
3UK1 ,
3UK2 ,
3UND ,
3UPT ,
3URR ,
3UW1 ,
3UW2 ,
3UW3 ,
3V2I ,
3V7N ,
3V8H ,
3V9O ,
3V9P ,
3VAV ,
4DDO ,
4DFE ,
4DHE ,
4DHK ,
4DUT ,
4DZ4 ,
4E4T ,
4E51 ,
4EFI ,
4EG0 ,
4EGJ ,
4EK2 ,
4EQY ,
4EWG ,
4EX5 ,
4EXQ ,
4F2G ,
4F32 ,
4F3N ,
4F3Y ,
4F4H ,
4F7D ,
4FK8 ,
4FRY ,
4G1K ,
4G67 ,
4G6Z ,
4GHK ,
4H3Y ,
4H3Z ,
4H4G
Sequences
These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols.
To find the specific sequence of any material you may have ordered, click on the "info" button next to the name of that material.
AA Sequence
MSSIDPKQFG KVAVLLGGNS AEREVSLNSG RLVLQGLRDA GIDAHPFDPA ERPLAALKEE GFVRAFNALH GGYGENGQIQ GALDFYGIRY TGSGVLGSAL GLDKFRTKLV WQQLGIPTPP FEAVLRGDDY EARAKEIVAK LGLPLFVKPA SEGSSVAVIK VKSADALPAA LIEAVKFDRI VVVEKSIEGG GEYTACIAGN LDLPVIRIVP AGEFYDYHAK YIANDTQYLI PCGLTADEEA RLKVLARRAF DVLGCTDWGR ADFMLDADGN PYFLEVNTAP GMTDHSLPPK AARAVGISYQ ELVVAVLALT LKD
NT Sequence
ATGAGCAGTA TCGACCCCAA ACAGTTCGGC AAGGTGGCAG TGCTGCTCGG CGGTAATTCC GCCGAGCGCG AGGTGTCGCT CAATTCCGGG CGTCTCGTGC TTCAAGGTCT GCGCGACGCC GGCATCGACG CGCATCCGTT CGATCCGGCC GAGCGTCCGC TCGCCGCATT GAAGGAAGAG GGCTTCGTGC GCGCGTTCAA CGCGCTGCAC GGCGGCTACG GCGAGAACGG CCAGATCCAG GGCGCGCTCG ATTTTTACGG CATCCGCTAC ACGGGCAGCG GCGTGCTCGG CTCGGCGCTC GGTCTGGACA AGTTCCGCAC CAAGCTCGTG TGGCAGCAAC TCGGTATTCC GACGCCGCCG TTCGAAGCCG TGCTGCGCGG CGACGACTAC GAAGCGCGCG CCAAGGAGAT CGTCGCGAAG CTCGGTTTGC CGCTTTTCGT GAAGCCGGCG AGCGAAGGTT CGAGCGTCGC GGTAATCAAG GTGAAAAGCG CAGACGCGCT GCCCGCCGCG TTGATCGAAG CAGTGAAGTT CGACAGGATC GTGGTGGTCG AAAAGAGTAT TGAAGGCGGC GGCGAATACA CCGCGTGCAT CGCCGGCAAT CTGGATTTGC CGGTGATCCG CATCGTGCCG GCCGGCGAGT TTTACGATTA CCACGCGAAG TACATCGCGA ACGACACGCA GTATCTGATT CCGTGCGGTC TGACGGCGGA CGAGGAGGCG CGTCTGAAAG TGCTGGCGCG CCGTGCCTTC GACGTGCTCG GCTGCACCGA CTGGGGCCGC GCGGATTTCA TGCTCGACGC CGACGGCAAC CCGTATTTCC TCGAAGTGAA CACGGCGCCC GGCATGACCG ATCACTCGCT GCCGCCGAAA GCGGCGAGAG CGGTGGGCAT CAGTTATCAG GAACTCGTTG TCGCCGTGTT GGCGCTGACG CTCAAGGAC
Details for BuxeA.00119.a.A1.GE33029
HARVESTED ON:
8/16/2011
SEQUENCED ON:
8/22/2011
EXPECTED MW:
35kDa
OBSERVED MW:
35kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Too many to count (100+)
TOTAL EXPRESSION LEVEL:
Moderate Expression
SOLUBLE EXPRESSION LEVEL
High Expression
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
pass with incomplete coverage
PERCENT IDENTITY:
100
PERCENT COVERAGE:
97
Details for BuxeA.00119.a.A1.PS01358
PURIFICATION DATe:
1/24/2012
CONCENTRATION:
115.9mg/ml
OBSERVED MW:
data unavailable
EXPRESSION LEVEL:
Low Expression
PROTEIN PURIFICATION BUFFER:
20 mM HEPES, pH 7.0, 300 mM NaCl, 5% glycerol and 1 mM TCEP
EXPRESSION HOST:
data unavailable
VIAL COUNT (approx.):
7
VIAL VOLUME:
110µl
PERCENT IDENTITY:
100
PERCENT COVERAGE:
97