SSGCID: Target Page

BuviA.00078.a

Peptide deformylase

CENTER ID:	BuviA.00078.a
ORGANISM:	Burkholderia vietnamiensis G4
ASSOCIATED DISEASE:
CURRENT STATUS:	soluble
COMMUNITY REQUEST:	False
NIH RISK GROUP:	3
SELECT AGENT:	False
NIH PRIORITY pathogens category:	IIIB

Ordering Clones & Proteins

If there are materials available for this target, they will be listed below. Materials can be ordered from SSGCID using the button in the "order material" column. Clicking the button will add the material to a virtual cart. You may order multiple materials at a time at no cost to you, as this contract is funded by NIAID. When you are ready to place your order, click the "Place Order" link which will appear in the top right corner of the page after you place your first item in your cart.

Clones*

CENTER REFERENCE ID	DOMAIN/REGION DESCRIPTION	INFO	AA START	AA STOP	ORDER MATERIAL
BuviA.00078.a.B1.GE38094	Full length( BuviA.00078.a )		1	177

* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis. Get sequence information using the button in the "info" column.

External Resources

RESOURCE	REFERENCE ID
BV-BRC:	fig\|269482.11.peg.6193
RefSeq:	YP_001119768.1
UniProt:	A4JF80

Sequences

These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "info" button next to the name of that material.

AA Sequence

MIREILKMGD PRLLEIAEPV GQFDTPELHE IVADMFETMH HANGAGLAAP QIGIGLQIII FGFGNNNRYP DAPPVPETVL INPKVEYMPP DMEEGWEGCL SVPGMRGVVS RYAKVRYVGY DQFGAKIDRV AEGFHARVVQ HEYDHLIGKL YPMRITDFTR FGFTDVLFPG LDPSDDD

NT Sequence

ATGATTCGCG AGATCCTGAA GATGGGCGAC CCGCGCCTGC TCGAAATCGC CGAGCCGGTC GGACAGTTCG ATACGCCGGA ACTGCACGAG ATCGTCGCGG ACATGTTCGA GACGATGCAT CACGCGAACG GAGCGGGGCT CGCCGCGCCG CAGATCGGCA TCGGGCTGCA GATCATCATC TTCGGCTTCG GCAACAACAA CCGCTATCCG GACGCGCCGC CGGTGCCCGA GACGGTGCTG ATCAATCCGA AGGTCGAATA CATGCCGCCG GACATGGAGG AGGGCTGGGA GGGCTGCCTG TCGGTGCCCG GCATGCGCGG CGTGGTGAGC CGTTATGCGA AGGTCCGCTA CGTCGGCTAC GACCAGTTCG GCGCGAAGAT CGACCGCGTC GCCGAAGGCT TCCATGCGCG CGTCGTGCAG CACGAATACG ATCATCTGAT CGGCAAACTC TATCCGATGC GGATCACCGA TTTCACGCGC TTCGGGTTCA CCGACGTGCT GTTCCCCGGG CTCGATCCGA GCGACGACGA C

Details for BuviA.00078.a.B1.GE38094

HARVESTED ON:	5/13/2014
SEQUENCED ON:	5/6/2014
EXPECTED MW:	21kDa
OBSERVED MW:	22kDa
ANTIBIOTIC MARKER:	ampicillin
COUNT OF EXPRESSION COLONIES:	Too many to count (100+)
TOTAL EXPRESSION LEVEL:	Moderate Expression
SOLUBLE EXPRESSION LEVEL	Moderate Expression
EXPRESSION HOST:	data unavailable
SEQUENCING RESULT:	pass
PERCENT IDENTITY:	100
PERCENT COVERAGE:	100

Validated AA Sequence

MAHHHHHHMI REILKMGDPR LLEIAEPVGQ FDTPELHEIV ADMFETMHHA NGAGLAAPQI GIGLQIIIFG FGNNNRYPDA PPVPETVLIN PKVEYMPPDM EEGWEGCLSV PGMRGVVSRY AKVRYVGYDQ FGAKIDRVAE GFHARVVQHE YDHLIGKLYP MRITDFTRFG FTDVLFPGLD PSDDD

Validated NT Sequence

annnnnattt nntttaactt tnagaaggag atataccatg gctcaccacc accaccacca tatgattcgc gagatcctga agatgggcga cccgcgcctg ctcgaaatcg ccgagccggt cggacagttc gatacgccgg aactgcacga gatcgtcgcg gacatgttcg agacgatgca tcacgcgaac ggagcggggc tcgccgcgcc gcagatcggc atcgggctgc agatcatcat cttcggcttc ggcaacaaca accgctatcc ggacgcgccg ccggtgcccg agacggtgct gatcaatccg aaggtcgaat acatgccgcc ggacatggag gagggctggg agggctgcct gtcggtgccc ggcatgcgcg gcgtggtgag ccgttatgcg aaggtccgct acgtcggcta cgaccagttc ggcgcgaaga tcgaccgcgt cgccgaaggc ttccatgcgc gcgtcgtgca gcacgaatac gatcatctga tcggcaaact ctatccgatg cggatcaccg atttcacgcg cttcgggttc accgacgtgc tgttccccgg gctcgatccg agcgacgacg actaagtgag taagatagga tccggctgct aacaaagccc cgaaaga

Expected Protein Sequence

Full NT Sequence (Expression Vector + Insert)

taatacgact cactataggg agaccacaac ggtttccctc tagaaataat tttgtttaac tttaagaagg agatatacca tggctcacca ccaccaccac catatgattc gcgagatcct gaagatgggc gacccgcgcc tgctcgaaat cgccgagccg gtcggacagt tcgatacgcc ggaactgcac gagatcgtcg cggacatgtt cgagacgatg catcacgcga acggagcggg gctcgccgcg ccgcagatcg gcatcgggct gcagatcatc atcttcggct tcggcaacaa caaccgctat ccggacgcgc cgccggtgcc cgagacggtg ctgatcaatc cgaaggtcga atacatgccg ccggacatgg aggagggctg ggagggctgc ctgtcggtgc ccggcatgcg cggcgtggtg agccgttatg cgaaggtccg ctacgtcggc tacgaccagt tcggcgcgaa gatcgaccgc gtcgccgaag gcttccatgc gcgcgtcgtg cagcacgaat acgatcatct gatcggcaaa ctctatccga tgcggatcac cgatttcacg cgcttcgggt tcaccgacgt gctgttcccc gggctcgatc cgagcgacga cgactgagta agataggatc cggctgctaa caaagcccga aaggaagctg agttggctgc tgccaccgct gagcaataac tagcataacc ccttggggcc tctaaacggg tcttgagggg ttttttgctg aaaggaggaa ctatatccgg atatccacag gacgggtgtg gtcgccatga tcgcgtagtc gatagtggct ccaagtagcg aagcgagcag gactgggcgg cggccaaagc ggtcggacag tgctccgaga acgggtgcgc atagaaattg catcaacgca tatagcgcta gcagcacgcc atagtgactg gcgatgctgt cggaatggac gatatcccgc aagaggcccg gcagtaccgg cataaccaag cctatgccta cagcatccag ggtgacggtg ccgaggatga cgatgagcgc attgttagat ttcatacacg gtgcctgact gcgttagcaa tttaactgtg ataaactacc gcattaaagc ttatcgatga taagctgtca aacatgagaa ttcttgaaga cgaaagggcc tcgtgatacg cctattttta taggttaatg tcatgataat aatggtttct tagacgtcag gtggcacttt tcggggaaat gtgcgcggaa cccctatttg tttatttttc taaatacatt caaatatgta tccgctcatg agacaataac cctgataaat gcttcaataa tattgaaaaa ggaagagtat gagtattcaa catttccgtg tcgcccttat tccctttttt gcggcatttt gccttcctgt ttttgctcac ccagaaacgc tggtgaaagt aaaagatgct gaagatcagt tgggtgcacg agtgggttac atcgaactgg atctcaacag cggtaagatc cttgagagtt ttcgccccga agaacgtttt ccaatgatga gcacttttaa agttctgcta tgtggcgcgg tattatcccg tgttgacgcc gggcaagagc aactcggtcg ccgcatacac tattctcaga atgacttggt tgagtactca ccagtcacag aaaagcatct tacggatggc atgacagtaa gagaattatg cagtgctgcc ataaccatga gtgataacac tgcggccaac ttacttctga caacgatcgg aggaccgaag gagctaaccg cttttttgca caacatgggg gatcatgtaa ctcgccttga tcgttgggaa ccggagctga atgaagccat accaaacgac gagcgtgaca ccacgatgcc tgcagcaatg gcaacaacgt tgcgcaaact attaactggc gaactactta ctctagcttc ccggcaacaa ttaatagact ggatggaggc ggataaagtt gcaggaccac ttctgcgctc ggcccttccg gctggctggt ttattgctga taaatctgga gccggtgagc gtgggtctcg cggtatcatt gcagcactgg ggccagatgg taagccctcc cgtatcgtag ttatctacac gacggggagt caggcaacta tggatgaacg aaatagacag atcgctgaga taggtgcctc actgattaag cattggtaac tgtcagacca agtttactca tatatacttt agattgattt aaaacttcat ttttaattta aaaggatcta ggtgaagatc ctttttgata atctcatgac caaaatccct taacgtgagt tttcgttcca ctgagcgtca gaccccgtag aaaagatcaa aggatcttct tgagatcctt tttttctgcg cgtaatctgc tgcttgcaaa caaaaaaacc accgctacca gcggtggttt gtttgccgga tcaagagcta ccaactcttt ttccgaaggt aactggcttc agcagagcgc agataccaaa tactgtcctt ctagtgtagc cgtagttagg ccaccacttc aagaactctg tagcaccgcc tacatacctc gctctgctaa tcctgttacc agtggctgct gccagtggcg ataagtcgtg tcttaccggg ttggactcaa gacgatagtt accggataag gcgcagcggt cgggctgaac ggggggttcg tgcacacagc ccagcttgga gcgaacgacc tacaccgaac tgagatacct acagcgtgag ctatgagaaa gcgccacgct tcccgaaggg agaaaggcgg acaggtatcc ggtaagcggc agggtcggaa caggagagcg cacgagggag cttccagggg gaaacgcctg gtatctttat agtcctgtcg ggtttcgcca cctctgactt gagcgtcgat ttttgtgatg ctcgtcaggg gggcggagcc tatggaaaaa cgccagcaac gcggcctttt tacggttcct ggccttttgc tggccttttg ctcacatgtt ctttcctgcg ttatcccctg attctgtgga taaccgtatt accgcctttg agtgagctga taccgctcgc cgcagccgaa cgaccgagcg cagcgagtca gtgagcgagg aagcggaaga gcgcctgatg cggtattttc tccttacgca tctgtgcggt atttcacacc gcatatatgg tgcactctca gtacaatctg ctctgatgcc gcatagttaa gccagtatac actccgctat cgctacgtga ctgggtcatg gctgcgcccc gacacccgcc aacacccgct gacgcgccct gacgggcttg tctgctcccg gcatccgctt acagacaagc tgtgaccgtc tccgggagct gcatgtgtca gaggttttca ccgtcatcac cgaaacgcgc gaggcagctg cggtaaagct catcagcgtg gtcgtgaagc gattcacaga tgtctgcctg ttcatccgcg tccagctcgt tgagtttctc cagaagcgtt aatgtctggc ttctgataaa gcgggccatg ttaagggcgg ttttttcctg tttggtcact gatgcctccg tgtaaggggg atttctgttc atgggggtaa tgataccgat gaaacgagag aggatgctca cgatacgggt tactgatgat gaacatgccc ggttactgga acgttgtgag ggtaaacaac tggcggtatg gatgcggcgg gaccagagaa aaatcactca gggtcaatgc cagcgcttcg ttaatacaga tgtaggtgtt ccacagggta gccagcagca tcctgcgatg cagatccgga acataatggt gcagggcgct gacttccgcg tttccagact ttacgaaaca cggaaaccga agaccattca tgttgttgct caggtcgcag acgttttgca gcagcagtcg cttcacgttc gctcgcgtat cggtgattca ttctgctaac cagtaaggca accccgccag cctagccggg tcctcaacga caggagcacg atcatgcgca cccgtggcca ggacccaacg ctgcccgaga tgcgccgcgt gcggctgctg gagatggcgg acgcgatgga tatgttctgc caagggttgg tttgcgcatt cacagttctc cgcaagaatt gattggctcc aattcttgga gtggtgaatc cgttagcgag gtgccgccgg cttccattca ggtcgaggtg gcccggctcc atgcaccgcg acgcaacgcg gggaggcaga caaggtatag ggcggcgcct acaatccatg ccaacccgtt ccatgtgctc gccgaggcgg cataaatcgc cgtgacgatc agcggtccag tgatcgaagt taggctggta agagccgcga gcgatccttg aagctgtccc tgatggtcgt catctacctg cctggacagc atggcctgca acgcgggcat cccgatgccg ccggaagcga gaagaatcat aatggggaag gccatccagc ctcgcgtcgc gaacgccagc aagacgtagc ccagcgcgtc ggccgccatg ccggcgataa tggcctgctt ctcgccgaaa cgtttggtgg cgggaccagt gacgaaggct tgagcgaggg cgtgcaagat tccgaatacc gcaagcgaca ggccgatcat cgtcgcgctc cagcgaaagc ggtcctcgcc gaaaatgacc cagagcgctg ccggcacctg tcctacgagt tgcatgataa agaagacagt cataagtgcg gcgacgatag tcatgccccg cgcccaccgg aaggagctga ctgggttgaa ggctctcaag ggcatcggtc gacgctctcc cttatgcgac tcctgcatta ggaagcagcc cagtagtagg ttgaggccgt tgagcaccgc cgccgcaagg aatggtgcat gcaaggagat ggcgcccaac agtcccccgg ccacggggcc tgccaccata cccacgccga aacaagcgct catgagcccg aagtggcgag cccgatcttc cccatcggtg atgtcggcga tataggcgcc agcaaccgca cctgtggcgc cggtgatgcc ggccacgatg cgtccggcgt agaggatcga gatctcgatc ccgcgaaat