BupsA.01663.c
Hep_Hag family
CENTER ID:
BupsA.01663.c
ORGANISM:
Burkholderia pseudomallei 1710b
ASSOCIATED DISEASE:
Melioidosis
CURRENT STATUS:
in PDB
COMMUNITY REQUEST:
True
NIH RISK GROUP:
3
SELECT AGENT:
True
NIH PRIORITY
pathogens category:
IIIB
Ordering Clones & Proteins
If there are materials available for this target, they will be listed below.
Materials can be ordered from SSGCID using the button in the "order material" column.
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Clones*
CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO
AA
START
AA
STOP
ORDER
MATERIAL
BupsA.01663.c.A1.GE26295
BupsA.01663.c.1 (Hep_Hag HIM 1)
info
314
501
BupsA.01663.c.A1.GE26295
BupsA.01663.c.A2.GE26296
BupsA.01663.c.2 (Hep_Hag HIM 2)
info
1131
1304
BupsA.01663.c.A2.GE26296
BupsA.01663.c.A8.GE29407
head2_HaYHN domain
info
1057
1315
BupsA.01663.c.A8.GE29407
BupsA.01663.c.A9.GE29408
head3_YN domain
info
1381
1553
BupsA.01663.c.A9.GE29408
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis . Get sequence information
using the button in the "info" column.
Proteins
CENTER REFERENCE ID
DOMAIN/REGION DESCRIPTION
INFO
AA START
AA STOP
ORDER MATERIAL
BupsA.01663.c.A1.PS00198b
BupsA.01663.c.1 (Hep_Hag HIM 1)
info
314
501
PS00198b
BupsA.01663.c.A2.PS00264
BupsA.01663.c.2 (Hep_Hag HIM 2)
info
1131
1304
PS00264
Structures
3S6L
DEPOSITED: 5/25/2011
DETERMINATION: XRay
CLONE: BupsA.01663.c.A9.GE29408
PROTEIN: BupsA.01663.c.A9.PW29322
Sequences
These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols.
To find the specific sequence of any material you may have ordered, click on the "info" button next to the name of that material.
AA Sequence
MLMFSTPAWA ALVGAENGTV NSSDGTASTT AGSGSAQASN TGIAFVGDVD CSAFTSGPGT YAGVYGSGSN YLGGLFGFGP QTSMASYGDP SNAGANAGIV AWQGAAQTFG NVTYAGNGTQ SGSHTQAFGM NSFAAGCVAH ATGLSATAIG WGTTASGAGS VALGLYSTAS GQGSLAFGTS ATATATDTIA LGTLATANAV SGVAIGANTQ ASAANATAIG GNSSGANLGA QATAAGATAI GGNATAGAAA TATNAIAIGG QSSAKDANDV AVGLGARAGT GSGAGNDLAI GNGATATGGN SIAQGAGASA NAAGAVAIGK SASAAGGQAV SIGVANTASG NGAVAIGDPN VATGTGAVAL GNNNTANGQG AVALGNVSTA VGQGSVALGN SSNAAAAGGV ALGDTASAVM AGGLALGSLA TASNANDVAL GAGSKTAAAV ATSTVSVNGA NYAVAGSGPA STVSVGAPGS ERTITNVAAG QVSAGSTDAV NGSELYATNQ AITTGLSTAN SSIASLSTST STGLSSANSN IGSLSTGLST TNSTVASLST STVAGLNSLS TGLSTTNSNV ASLSSSTSTG LSSANSAVAS LSTSTSTGLS SANSNIDSLS TGLSTTNSTV ASLSTSTVAG LNSLSTGLST TNSNVASLSS STSTGLSSAN SAVASLSTST STGLSSANSN IGSLSTGLST ANSTVASLST STVAGLNSLS TGLSTTNSNV ASLSSSTSTG LSSANSAVVS LSTSASTGLS SANSNIGSLS TGLSTTNSTV ASLSSSTSTG IGSLSTGVAN SVQYDSPAHT SITLGGASAT SPVKITNLAA GANPSDAVNY EQLTSLSTSA STGLSSANSA ITSLSTSTST GIGSLSTGLS TTNSNVASLS TSASTGLSSA NSAITSLSTS TSTGIGSLST GLSTTNSNVA SLSTSASTGL SSANSAITSL STSTSTGIGS LSTGLSTTNS NVASLSTSAS TGLSSAISAI TSLSTSTSTG IGSLSTGLST TNSNVASLST SASTGLSSAN SAITSLSTST STGIGSLSTG LSTTNSNLSS LSTSSSTGLS TANSNISSLS TGLNSLSTAV NGGGTKYFHA NSTQPDSQAL GADSVAVGPA AIAAGASGIA IGNAANAAAN GAVAIGQAAV AKGGLAVSIG VSNTASGDGA VAIGDPNVAT GTGAVALGAD NSANGQGAVA LGNANIATGT GSLAFGNTST AAAAGAVALG AGAIANNAND VALGSASVTA AANPVASALI AGQAYSLAGG APASVVSVGA PGAERQITNV AAGRISATST DAVNGSQMNA MTQALESLST STASALSTAQ SGLGSLSTGL SSTQSSVSSL STGLSTTSGN VASLSSGLGT MQSGIASLST GLSTTNSSLA SLSTAVSGGG VRTSSLGDTS AGNGANASGG NGTAVGGAAS ASGTDATALG QASNASGNHS TALGQASSAS GSGSTAVGQG AGAPGDGASA FGQGALASGT DSTALGAHST AAAPNSAAIG ANSVASAPNS VSFGSRGHER RLTNVAPGID GTDAANMNQL WGVQSSVDQA ARRAYSGVAA ATALTMIPEV DPGKTIAVGI GAGSYQGYSA SAIGVSVRFS DNLKAKLGVG ISAQGSTYGA GVSYQW
NT Sequence
atgttgatgt tttccactcc cgcatgggct gccctcgtag gggctgaaaa tgggaccgtc aactcgtctg acgggacagc ctcgaccaca gccggcagtg gttccgctca agccagtaat acgggtattg ccttcgtcgg tgatgttgac tgctcggcgt ttacgtcggg acctggcaca tatgccggcg tgtacggctc cgggagcaat tatctgggtg gccttttcgg ctttggtccg caaacatcga tggccagtta cggtgatccg agcaacgccg gcgctaatgc cggtatcgtt gcatggcagg gcgctgccca aacgttcggc aatgtcacct acgccggcaa tggcacgcag agcggcagcc acacgcaggc gttcggcatg aactccttcg cggcgggctg cgttgctcac gcgaccggcc tgagcgcgac ggcgatcggc tggggaacca ccgcgagcgg cgccggaagc gtcgcgctcg ggctctacag caccgcgagc ggccagggat cgttggcgtt cggcaccagc gcgacggcga cggccaccga caccatcgcg ctcggcacgt tggccacggc caacgcggtc agcggcgtgg cgatcggcgc gaacacgcag gcttcggccg ccaatgcaac cgcgatcggc ggcaattcat ccggcgccaa cctcggcgcg caggcgacgg cggccggcgc cactgcgatc ggcggcaacg cgacggccgg ggccgccgcg acggcgacga acgccatcgc gatcggcggg cagtcgtcgg cgaaggatgc gaacgatgtg gccgtgggcc tgggcgcgag ggccggcacg ggaagcggcg cgggcaacga tctcgcgatc ggcaatggcg cgacggccac gggcggcaat tcgatcgccc agggcgcggg cgcgagcgcc aatgcggccg gcgcggtggc catcggcaaa tcggcgtccg ccgccggcgg gcaagccgtt tcgatcggcg tggccaatac cgcgtcgggc aacggcgcgg tggcgatcgg cgatccgaac gtcgcgaccg gaaccggcgc tgtcgcgctg ggcaacaaca atacggccaa tggtcaaggc gcggtggcgc tgggcaacgt cagcacggcg gtcggccaag gcagcgtggc gctcggcaac agcagcaatg cggccgcggc gggcggagtg gccttgggcg ataccgcgag cgcggtgatg gcgggcggct tggcactcgg ctcgctcgcg acggcgagca atgcgaacga cgtggcgctc ggcgcgggtt cgaaaaccgc cgcggcagtc gcgacgtcca cggtttcggt gaacggcgcc aactacgcgg tggcgggaag cggcccggcc agcacggtca gcgtgggtgc gccgggcagc gagcgcacga tcaccaatgt ggccgcgggt caagtaagcg ccggttccac cgatgcggtg aatggttcgg aactgtacgc gacgaaccag gcaatcacga ccggattgtc gacagcgaac agcagcatcg cgtcgctgtc cacgtcgacg tcgacgggtc tttcgagcgc caacagcaac atcggctcgt tgtcgacggg tttgtcgacc acgaacagca cggttgcgtc gttgtcgacg tccacggttg ccggcctgaa ttcgctgtcc accggattga gcacgaccaa tagcaatgtc gcgtcgctgt cgagttccac gtcgacggga ttgtcctcgg ccaatagcgc ggtggcgtca ctgtccacgt cgacgtcgac gggtctttcg agcgccaaca gcaacatcga ctcgttgtcg acgggcttgt cgaccacgaa cagcacggtt gcgtcgttgt cgacgtccac ggttgccggc ctgaattcgc tgtccaccgg attgagcacg accaatagca atgtcgcgtc gctgtcgagt tccacgtcga cggggctgtc ctcggccaat agcgcggtgg cgtcgctgtc cacgtcgacg tcgacgggtc tttcgagcgc caacagcaac atcggctcgt tgtcgacggg cttgtcgacc gccaacagca cggttgcgtc gttgtcgacg tccacggttg ccggcctgaa ttcgctgtcc accggattga gcacgaccaa tagcaatgtc gcgtcgctgt cgagttccac gtcgacggga ttgtcctcgg ccaatagcgc ggtggtgtcg ctgtccacgt cggcgtcgac gggtctctcg agcgcaaaca gcaacatcgg ctcgttgtcg acaggtttgt cgaccacgaa cagcacggtt gcgtcgttgt cgagctcgac gtcgaccggt atcggttcgt tgtcgacggg ggtggccaat tctgtccagt atgacagtcc tgctcatacg tccattaccc tgggtggcgc cagtgcaacg tcacccgtga agatcactaa tttggcggcg ggcgcgaacc cgagcgatgc cgtcaactat gagcaactga catcgctgtc gacgtcggcg tcgacgggac tgtcgtcggc caacagcgcg atcacgtcgc tgtccacctc gacgtcgacc ggcatcggct cgctgtccac cggactgagc acgaccaaca gcaacgtcgc gtcgttgtcg acgtcggcgt cgacgggact gtcgtcggcc aacagcgcga tcacgtcgct gtccacctcg acgtcgaccg gcatcggttc gctgtccacc gggttgagca cgaccaacag caacgtcgcg tcgctgtcga cgtcggcgtc gacgggactg tcgtcggcca acagcgcgat cacatcgcta tccacctcga cgtcgaccgg catcggttcg ctgtccaccg gactgagcac gaccaacagc aacgtcgcgt cgctgtcgac gtcggcgtcg acgggactgt cgtcggccat cagcgcgatc acgtcgctgt ccacctcgac gtcgaccggt atcggctcgc tgtccaccgg gttgagcacg accaacagca acgtcgcgtc gctgtcgacg tcggcgtcga cgggactgtc gtcggccaac agcgcgatca cgtcgctgtc cacctcgacg tcgaccggca tcggttcgct gtccaccggg ttgagcacga ccaacagcaa tctgagctcc ctgtccacgt cgagctcgac cggcttgagt acggccaaca gcaacatctc gtcgctgtcc accgggctga attcgttgtc gaccgcggtc aacggcggcg ggacgaagta cttccacgcc aactcgacgc agccggacag tcaggcgctg ggggcggatt ccgtcgcggt cgggccggcg gccatcgcgg cgggcgcaag cggcattgcg atcggcaatg cggcgaacgc ggccgcaaac ggcgccgtcg cgatcggcca ggccgccgtc gcgaagggcg ggctggctgt ctcgatcggg gtgtcgaaca cggcgagcgg agacggcgcg gtggcgatcg gcgatccgaa cgtcgcgacc ggcaccggcg cggtcgcgct tggcgcggac aattcggcaa acggccaggg cgccgtcgcg ctcggcaacg cgaacatcgc aaccggaacg ggctcgcttg cgttcggcaa cacgtcgacg gcggcagcgg cgggcgcggt cgcgttgggc gccggcgcaa tcgcgaacaa tgcgaacgat gtcgcgctgg gttccgctag cgtgaccgcg gctgcgaatc cggtggccag cgcgttgatc gcaggtcagg cttattcgct tgccggcggc gcgccggcga gcgtggtgag cgtcggcgcg cccggcgccg aacggcaaat caccaacgtc gcggccgggc ggatttccgc cacgtcgacc gatgcggtga acggctcgca gatgaatgcg atgactcagg cgctggaatc gctgtcgact tcgacggcca gcgcgctgtc cacggcgcaa agcggtctgg gttcgttgtc gacggggctc agctcgacgc agagcagcgt gagttcgctg tcgacggggc tcagcacgac gagcggcaat gtggcgtcgc tgtcgagcgg tctgggcacg atgcaaagcg gtatcgcgtc gctgtccacg gggctgagca cgacgaacag cagcctcgcg tcgctgtcga ccgccgtgtc cggcggcggt gttcgcacca gcagcttggg cgacacgtcg gcgggcaatg gcgcgaacgc gtccggcggc aacggcacgg cggtcggcgg cgccgcgtcc gcttcgggaa ccgatgcgac cgcgctgggc caggcgtcga acgcgtcggg caatcattcg accgcattgg ggcaagcatc gagcgcgtcc ggaagcggct ccaccgcggt gggacaaggc gccggcgcgc ccggcgacgg cgcttcggca ttcggccaag gggcacttgc ctccggtacg gactcgacgg cgctcggcgc tcattcgacg gctgcggcgc cgaactcggc ggcgatcggc gcgaattcgg tggcgtccgc gccgaattcg gtgtcgttcg gttcgcgggg ccatgagcgc aggctgacga atgtcgcgcc ggggatcgac ggcaccgacg cggcgaacat gaaccagctc tggggcgtgc aatcgagcgt cgatcaggcg gcgcgccgcg cctattccgg ggtggcggcc gcgaccgcgc tgacgatgat tccggaggtc gaccccggca agacgatcgc ggtcgggatc ggcgcgggca gctatcaagg gtattcggcg tccgcgatcg gcgtgtccgt gcggttctcc gacaacctga aggcgaagct cggcgtgggg atcagcgctc agggcagcac atatggcgca ggtgtctcgt accagtggta g
Details for BupsA.01663.c.A1.GE26295
HARVESTED ON:
3/10/2009
SEQUENCED ON:
3/26/2009
EXPECTED MW:
19kDa
OBSERVED MW:
23kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Good (10-50)
TOTAL EXPRESSION LEVEL:
Moderate Expression
SOLUBLE EXPRESSION LEVEL
High Expression
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
pass
PERCENT IDENTITY:
100
PERCENT COVERAGE:
94
Details for BupsA.01663.c.A2.GE26296
HARVESTED ON:
3/10/2009
SEQUENCED ON:
3/26/2009
EXPECTED MW:
18kDa
OBSERVED MW:
15kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Good (10-50)
TOTAL EXPRESSION LEVEL:
High Expression
SOLUBLE EXPRESSION LEVEL
High Expression
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
pass
PERCENT IDENTITY:
100
PERCENT COVERAGE:
69
Details for BupsA.01663.c.A8.GE29407
HARVESTED ON:
5/27/2010
SEQUENCED ON:
6/14/2010
EXPECTED MW:
25kDa
OBSERVED MW:
28kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Good (10-50)
TOTAL EXPRESSION LEVEL:
Low Expression
SOLUBLE EXPRESSION LEVEL
Low Expression
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
pass
PERCENT IDENTITY:
100
PERCENT COVERAGE:
100
Details for BupsA.01663.c.A9.GE29408
HARVESTED ON:
data unavailable
SEQUENCED ON:
6/14/2010
EXPECTED MW:
18kDa
OBSERVED MW:
24kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Good (10-50)
TOTAL EXPRESSION LEVEL:
Low Expression
SOLUBLE EXPRESSION LEVEL
Moderate Expression
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
pass
PERCENT IDENTITY:
100
PERCENT COVERAGE:
100
Details for BupsA.01663.c.A1.PS00198b
PURIFICATION DATe:
4/16/2009
CONCENTRATION:
10.4mg/ml
OBSERVED MW:
data unavailable
EXPRESSION LEVEL:
Low Expression
PROTEIN PURIFICATION BUFFER:
20 mM HEPES, pH 7.0, 300 mM NaCl, 5% glycerol and 1 mM TCEP
EXPRESSION HOST:
data unavailable
VIAL COUNT (approx.):
15
VIAL VOLUME:
50µl
PERCENT IDENTITY:
100
PERCENT COVERAGE:
94
Details for BupsA.01663.c.A2.PS00264
PURIFICATION DATe:
4/16/2009
CONCENTRATION:
43.5mg/ml
OBSERVED MW:
data unavailable
EXPRESSION LEVEL:
Low Expression
PROTEIN PURIFICATION BUFFER:
20 mM HEPES, pH 7.0, 300 mM NaCl, 5% glycerol and 1 mM TCEP
EXPRESSION HOST:
data unavailable
VIAL COUNT (approx.):
1
VIAL VOLUME:
100µl
PERCENT IDENTITY:
100
PERCENT COVERAGE:
69