BuphA.00113.a
Beta-ketoacyl synthase
CENTER ID:
BuphA.00113.a
ORGANISM:
Burkholderia phymatum STM815
ASSOCIATED DISEASE:
CURRENT STATUS:
in PDB
COMMUNITY REQUEST:
True
NIH RISK GROUP:
3
SELECT AGENT:
False
NIH PRIORITY
pathogens category:
IIIB
Ordering Clones & Proteins
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Clones*
CENTER REFERENCE ID
DOMAIN/REGION DESCRIPTION
INFO
AA START
AA STOP
ORDER MATERIAL
BuphA.00113.a.A1.GE32278
Full length( BuphA.00113.a )
info
1
408
BuphA.00113.a.A1.GE32278
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis . Get sequence information
using the button in the "info" column.
Proteins
CENTER REFERENCE ID
DOMAIN/REGION DESCRIPTION
INFO
AA START
AA STOP
ORDER MATERIAL
BuphA.00113.a.A1.PS01343
Full length( BuphA.00113.a )
info
1
408
PS01343
Structures
4EWG
DEPOSITED: 4/26/2012
DETERMINATION: XRay
CLONE: BuphA.00113.a.A1.GE32278
PROTEIN: BuphA.00113.a.A1.PS01343
Publications by SSGCID
Combining functional and structural genomics to sample the essential Burkholderia structome.
Abendroth J, Armour B, Barrett L, Baugh L, Begley DW, Buchko GW, Choi R, Clifton MC, Dieterich SH, Dranow DM, Edwards TE, Fairman JW, Fox D, Gallagher LA, Gardberg AS, Gillespie A, Manoil C, Myler PJ, Nakazawa-Hewitt S, Napuli A, Nguyen MT, Patrapuvich R, Phan I, Stacy R, Staker BL, Stewart LJ, Van Voorhis WC
PLoS ONE - 2012
volume 8, issue 1, pages e53851
PDB:
3D63 ,
3DAH ,
3EIZ ,
3EJ2 ,
3EK2 ,
3EZO ,
3F0F ,
3FTP ,
3GK0 ,
3GK3 ,
3GVF ,
3GWA ,
3GWE ,
3IML ,
3SZ8 ,
3T4C ,
3TML ,
3TMQ ,
3TXY ,
3U7J ,
3UE9 ,
3UK1 ,
3UK2 ,
3UND ,
3UPT ,
3URR ,
3UW1 ,
3UW2 ,
3UW3 ,
3V2I ,
3V7N ,
3V8H ,
3V9O ,
3V9P ,
3VAV ,
4DDO ,
4DFE ,
4DHE ,
4DHK ,
4DUT ,
4DZ4 ,
4E4T ,
4E51 ,
4EFI ,
4EG0 ,
4EGJ ,
4EK2 ,
4EQY ,
4EWG ,
4EX5 ,
4EXQ ,
4F2G ,
4F32 ,
4F3N ,
4F3Y ,
4F4H ,
4F7D ,
4FK8 ,
4FRY ,
4G1K ,
4G67 ,
4G6Z ,
4GHK ,
4H3Y ,
4H3Z ,
4H4G
Sequences
These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols.
To find the specific sequence of any material you may have ordered, click on the "info" button next to the name of that material.
AA Sequence
MKRVVITGMG GVTALGSRWD EIEAALKAGR NAVRRMPDWD YFESLHTRLA APLPGFAQPA DWPRKKTRSM GRVSMYAVRA SELALADAGF AGDESISDGR MGVAYGSSSG SVEPIRAFGT MLESGSMTDV TSNSYVQMMP HTTAVNVSLF WDLKGRIVPT SSACASGSQA IGYAYENIAM GKQTLMLAGG AEELSGPAVA VFDTLYATST RNDEPHLTPR PFDAKRDGLV VGEGAATLVL EEYEHAKARG ATIHAEIVGF GCNSDGAHMT QPTASTMARA MQLALEDAKL DANAIAYVNA HGTSTDRGDV AESQATARTF GERMPISSLK SYVGHTLGAC GALEAWWTIE MMKRNWYAPT LNLTEVDPAC APLDYIRGEA RAIDAEYVMS NNFAFGGINT SLIFRRVR
NT Sequence
ATGAAGCGTG TCGTCATTAC GGGCATGGGC GGCGTCACGG CGCTCGGCAG CCGCTGGGAC GAGATCGAAG CGGCACTGAA GGCAGGCCGC AACGCGGTGC GGCGCATGCC GGACTGGGAT TACTTCGAGT CGCTGCATAC GCGTCTCGCG GCGCCGCTGC CTGGGTTCGC TCAACCCGCC GACTGGCCGC GCAAGAAGAC GCGCTCGATG GGCAGGGTAT CGATGTACGC GGTGCGCGCG AGCGAACTCG CGCTCGCCGA TGCGGGTTTC GCGGGGGACG AGTCGATCAG CGACGGCCGC ATGGGCGTCG CATACGGCTC GTCGTCGGGT TCCGTCGAAC CGATCCGCGC ATTCGGCACG ATGCTCGAAT CGGGTTCGAT GACCGACGTC ACGTCGAACA GCTACGTGCA GATGATGCCG CACACGACGG CCGTCAACGT GAGCCTCTTC TGGGATCTGA AGGGGCGTAT CGTGCCGACC TCGTCGGCAT GTGCGTCGGG CAGCCAGGCA ATCGGCTATG CCTACGAAAA TATCGCCATG GGCAAGCAGA CGCTCATGCT CGCGGGCGGC GCGGAAGAAC TGTCGGGGCC GGCCGTCGCC GTGTTCGACA CGCTGTATGC GACCAGCACG CGCAATGACG AGCCGCACCT GACGCCGCGT CCGTTCGACG CGAAGCGCGA CGGTCTCGTG GTCGGCGAGG GCGCGGCGAC GCTCGTGCTC GAAGAATACG AGCACGCGAA GGCGCGCGGC GCGACGATCC ATGCGGAGAT CGTCGGCTTC GGCTGCAATT CGGACGGCGC GCACATGACG CAGCCGACGG CGAGCACGAT GGCGCGCGCG ATGCAGCTCG CGCTCGAAGA CGCAAAGCTC GACGCGAATG CGATTGCCTA TGTGAACGCG CACGGCACGT CGACGGATCG CGGCGACGTG GCGGAGAGCC AGGCCACGGC ACGGACTTTC GGCGAGCGCA TGCCGATCTC GTCGCTGAAG AGCTACGTCG GCCATACGCT TGGTGCATGC GGCGCGCTCG AAGCGTGGTG GACGATCGAA ATGATGAAGC GCAACTGGTA CGCGCCGACG CTCAATTTGA CTGAAGTCGA TCCCGCTTGC GCGCCGCTCG ATTACATTCG AGGCGAGGCA CGCGCGATCG ATGCCGAATA CGTGATGAGC AATAACTTCG CGTTTGGGGG CATCAACACG TCGCTGATTT TCAGGCGCGT TCGA
Details for BuphA.00113.a.A1.GE32278
HARVESTED ON:
7/28/2011
SEQUENCED ON:
8/3/2011
EXPECTED MW:
46kDa
OBSERVED MW:
46kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Good (10-50)
TOTAL EXPRESSION LEVEL:
Moderate Expression
SOLUBLE EXPRESSION LEVEL
Low Expression
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
pass with incomplete coverage
PERCENT IDENTITY:
100
PERCENT COVERAGE:
95
Details for BuphA.00113.a.A1.PS01343
PURIFICATION DATe:
1/12/2012
CONCENTRATION:
24.9mg/ml
OBSERVED MW:
data unavailable
EXPRESSION LEVEL:
Low Expression
PROTEIN PURIFICATION BUFFER:
20 mM HEPES, pH 7.0, 300 mM NaCl, 5% glycerol and 1 mM TCEP
EXPRESSION HOST:
data unavailable
VIAL COUNT (approx.):
1
VIAL VOLUME:
200µl
PERCENT IDENTITY:
100
PERCENT COVERAGE:
95