SSGCID: Target Page

BuceA.00010.l

Putative short chain dehydrogenase

CENTER ID:	BuceA.00010.l
ORGANISM:	Burkholderia cenocepacia J2315
ASSOCIATED DISEASE:
CURRENT STATUS:	expressed
COMMUNITY REQUEST:	False
NIH RISK GROUP:	3
SELECT AGENT:	False
NIH PRIORITY pathogens category:	IIIB

Ordering Clones & Proteins

If there are materials available for this target, they will be listed below. Materials can be ordered from SSGCID using the button in the "order material" column. Clicking the button will add the material to a virtual cart. You may order multiple materials at a time at no cost to you, as this contract is funded by NIAID. When you are ready to place your order, click the "Place Order" link which will appear in the top right corner of the page after you place your first item in your cart.

Clones*

CENTER REFERENCE ID	DOMAIN/REGION DESCRIPTION	INFO	AA START	AA STOP	ORDER MATERIAL
BuceA.00010.l.B2.GE36340	Mature protein( BuceA.00010.l )		21	257

* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis. Get sequence information using the button in the "info" column.

External Resources

RESOURCE	REFERENCE ID
BV-BRC:	fig\|216591.5.peg.709
RefSeq:	YP_002229834.1
UniProt:	B4E9M6

Sequences

These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "info" button next to the name of that material.

AA Sequence

MTTPLKVFIT GASSGLGLAM AEEYARQGAT LALVARRTDA LDAFARRFPK LSISVYSADV RDADALATAA ASFIATHGCP DVVIANAGIS QGAVTGQGDL AAFRDVMDIN YYGMVATFEP FVGPMTAARH GTLVGVASVA GVRGLPGSGA YSASKSAAIK YLEALRVELR PAGVGVVTIA PGYIRTPMTA HNPYRMPFLM DADRFAARAA QAIARQHAFR VIPWQMGVVA KVLHVLPRWL YDRLFEKAPR KPKAGAH

NT Sequence

ATGACTACTC CGCTGAAGGT CTTCATCACC GGCGCGTCGA GCGGCCTCGG CCTCGCGATG GCCGAGGAAT ACGCCCGCCA GGGCGCCACG CTCGCGCTCG TCGCGCGGCG CACCGATGCA CTCGATGCGT TCGCGCGGCG TTTCCCGAAG CTGTCCATCT CCGTCTATTC CGCCGACGTG CGCGACGCCG ATGCGCTCGC GACGGCCGCC GCGTCGTTCA TCGCGACGCA CGGCTGCCCG GACGTCGTGA TCGCGAACGC AGGCATCAGC CAGGGCGCCG TCACGGGCCA GGGCGATCTC GCGGCGTTCC GCGACGTGAT GGACATCAAC TACTACGGGA TGGTCGCGAC GTTCGAGCCG TTCGTCGGCC CGATGACGGC CGCGCGCCAC GGCACGCTGG TCGGCGTCGC GAGCGTCGCC GGCGTGCGCG GGCTGCCCGG CTCCGGCGCG TACAGCGCGT CGAAGTCGGC CGCGATCAAG TATCTCGAAG CGCTGCGCGT CGAGCTGCGT CCGGCCGGTG TCGGCGTCGT GACGATCGCG CCCGGCTACA TTCGCACGCC GATGACCGCG CACAACCCGT ACCGGATGCC GTTCCTGATG GACGCCGACC GCTTCGCCGC ACGGGCGGCG CAGGCGATCG CCCGGCAGCA CGCGTTCCGC GTGATTCCGT GGCAGATGGG CGTCGTCGCG AAGGTGCTGC ACGTGCTGCC GCGCTGGCTG TACGACCGCC TGTTCGAAAA GGCGCCGCGC AAGCCGAAGG CCGGCGCGCA C

Details for BuceA.00010.l.B2.GE36340

HARVESTED ON:	10/23/2012
SEQUENCED ON:	10/26/2012
EXPECTED MW:	26kDa
OBSERVED MW:	26kDa
ANTIBIOTIC MARKER:	ampicillin
COUNT OF EXPRESSION COLONIES:	Many (50-100)
TOTAL EXPRESSION LEVEL:	Low Expression
SOLUBLE EXPRESSION LEVEL	No Expression
EXPRESSION HOST:	data unavailable
SEQUENCING RESULT:	pass
PERCENT IDENTITY:	98
PERCENT COVERAGE:	100

Validated AA Sequence

MAHHHHHHMA EEYARQGATL ALVARRTDAL DAFARRFPKL SISVYSADVR DADALATAAA SFIATHGCPD VVIANAGISQ GAVTGQGDLA AFRDVMDINY YGMVATFEPF VGPMTAARHG TLVGVASVAG VRGLPGSGAY SASKSAAIKY LEALRVELRP AGVGVVTIAP GYIRTPMTAH NPYRMPFLMD ADRFAARAAX AIARQHAFRV IPWQMGVVAK VLHVLPRWLY DRLFEKAPRK PXXGAH

Validated NT Sequence

tttgtnnnnt ttaagaagga gatataccat ggctcaccac caccaccacc atatggccga ggaatacgcc cgccagggcg ccacgctcgc gctcgtcgcg cggcgcaccg atgcactcga tgcgttcgcg cggcgtttcc cgaagctgtc catctccgtc tattccgccg acgtgcgcga cgccgatgcg ctcgcgacgg ccgccgcgtc gttcatcgcg acgcacggct gcccggacgt cgtgatcgcg aacgcaggca tcagccaggg cgccgtcacg ggccagggcg atctcgcggc gttccgcgac gtgatggaca tcaactacta cgggatggtc gcgacgttcg agccgttcgt cggcccgatg acggccgcgc gccacggcac gctggtcggc gtcgcgagcg tcgccggcgt gcgcgggctg cccggctccg gcgcgtacag cgcgtcgaag tcggccgcga tcaagtatct cgaagcgctg cgcgtcgagc tgcgtccggc cggtgtcggc gtcgtgacga tcgcgcccgg ctacattcgc acgccgatga ccgcgcacaa cccgtaccgg atgccgttcc tgatggacgc cgaccgcttc gccgcacggg cggcgcangc gatcgcccgg cagcacgcgt tccgcgtgat tccgtggcag atgggcgtcg tcgcgaaggt gctgcacgtg ctgccgcgct ggctgtacga ccgcctgttc gaaaaggcgc cgcgcaagcc gaannccggc gcgcactaag tgagtaagat aggatccggc tgcnnnnnnc ccccnnnnnn nna

Expected Protein Sequence

MAHHHHHHMA EEYARQGATL ALVARRTDAL DAFARRFPKL SISVYSADVR DADALATAAA SFIATHGCPD VVIANAGISQ GAVTGQGDLA AFRDVMDINY YGMVATFEPF VGPMTAARHG TLVGVASVAG VRGLPGSGAY SASKSAAIKY LEALRVELRP AGVGVVTIAP GYIRTPMTAH NPYRMPFLMD ADRFAARAAQ AIARQHAFRV IPWQMGVVAK VLHVLPRWLY DRLFEKAPRK PKAGAH

Full NT Sequence (Expression Vector + Insert)

taatacgact cactataggg agaccacaac ggtttccctc tagaaataat tttgtttaac tttaagaagg agatatacca tggctcacca ccaccaccac catatggccg aggaatacgc ccgccagggc gccacgctcg cgctcgtcgc gcggcgcacc gatgcactcg atgcgttcgc gcggcgtttc ccgaagctgt ccatctccgt ctattccgcc gacgtgcgcg acgccgatgc gctcgcgacg gccgccgcgt cgttcatcgc gacgcacggc tgcccggacg tcgtgatcgc gaacgcaggc atcagccagg gcgccgtcac gggccagggc gatctcgcgg cgttccgcga cgtgatggac atcaactact acgggatggt cgcgacgttc gagccgttcg tcggcccgat gacggccgcg cgccacggca cgctggtcgg cgtcgcgagc gtcgccggcg tgcgcgggct gcccggctcc ggcgcgtaca gcgcgtcgaa gtcggccgcg atcaagtatc tcgaagcgct gcgcgtcgag ctgcgtccgg ccggtgtcgg cgtcgtgacg atcgcgcccg gctacattcg cacgccgatg accgcgcaca acccgtaccg gatgccgttc ctgatggacg ccgaccgctt cgccgcacgg gcggcgcagg cgatcgcccg gcagcacgcg ttccgcgtga ttccgtggca gatgggcgtc gtcgcgaagg tgctgcacgt gctgccgcgc tggctgtacg accgcctgtt cgaaaaggcg ccgcgcaagc cgaaggccgg cgcgcactga gtaagatagg atccggctgc taacaaagcc cgaaaggaag ctgagttggc tgctgccacc gctgagcaat aactagcata accccttggg gcctctaaac gggtcttgag gggttttttg ctgaaaggag gaactatatc cggatatcca caggacgggt gtggtcgcca tgatcgcgta gtcgatagtg gctccaagta gcgaagcgag caggactggg cggcggccaa agcggtcgga cagtgctccg agaacgggtg cgcatagaaa ttgcatcaac gcatatagcg ctagcagcac gccatagtga ctggcgatgc tgtcggaatg gacgatatcc cgcaagaggc ccggcagtac cggcataacc aagcctatgc ctacagcatc cagggtgacg gtgccgagga tgacgatgag cgcattgtta gatttcatac acggtgcctg actgcgttag caatttaact gtgataaact accgcattaa agcttatcga tgataagctg tcaaacatga gaattcttga agacgaaagg gcctcgtgat acgcctattt ttataggtta atgtcatgat aataatggtt tcttagacgt caggtggcac ttttcgggga aatgtgcgcg gaacccctat ttgtttattt ttctaaatac attcaaatat gtatccgctc atgagacaat aaccctgata aatgcttcaa taatattgaa aaaggaagag tatgagtatt caacatttcc gtgtcgccct tattcccttt tttgcggcat tttgccttcc tgtttttgct cacccagaaa cgctggtgaa agtaaaagat gctgaagatc agttgggtgc acgagtgggt tacatcgaac tggatctcaa cagcggtaag atccttgaga gttttcgccc cgaagaacgt tttccaatga tgagcacttt taaagttctg ctatgtggcg cggtattatc ccgtgttgac gccgggcaag agcaactcgg tcgccgcata cactattctc agaatgactt ggttgagtac tcaccagtca cagaaaagca tcttacggat ggcatgacag taagagaatt atgcagtgct gccataacca tgagtgataa cactgcggcc aacttacttc tgacaacgat cggaggaccg aaggagctaa ccgctttttt gcacaacatg ggggatcatg taactcgcct tgatcgttgg gaaccggagc tgaatgaagc cataccaaac gacgagcgtg acaccacgat gcctgcagca atggcaacaa cgttgcgcaa actattaact ggcgaactac ttactctagc ttcccggcaa caattaatag actggatgga ggcggataaa gttgcaggac cacttctgcg ctcggccctt ccggctggct ggtttattgc tgataaatct ggagccggtg agcgtgggtc tcgcggtatc attgcagcac tggggccaga tggtaagccc tcccgtatcg tagttatcta cacgacgggg agtcaggcaa ctatggatga acgaaataga cagatcgctg agataggtgc ctcactgatt aagcattggt aactgtcaga ccaagtttac tcatatatac tttagattga tttaaaactt catttttaat ttaaaaggat ctaggtgaag atcctttttg ataatctcat gaccaaaatc ccttaacgtg agttttcgtt ccactgagcg tcagaccccg tagaaaagat caaaggatct tcttgagatc ctttttttct gcgcgtaatc tgctgcttgc aaacaaaaaa accaccgcta ccagcggtgg tttgtttgcc ggatcaagag ctaccaactc tttttccgaa ggtaactggc ttcagcagag cgcagatacc aaatactgtc cttctagtgt agccgtagtt aggccaccac ttcaagaact ctgtagcacc gcctacatac ctcgctctgc taatcctgtt accagtggct gctgccagtg gcgataagtc gtgtcttacc gggttggact caagacgata gttaccggat aaggcgcagc ggtcgggctg aacggggggt tcgtgcacac agcccagctt ggagcgaacg acctacaccg aactgagata cctacagcgt gagctatgag aaagcgccac gcttcccgaa gggagaaagg cggacaggta tccggtaagc ggcagggtcg gaacaggaga gcgcacgagg gagcttccag ggggaaacgc ctggtatctt tatagtcctg tcgggtttcg ccacctctga cttgagcgtc gatttttgtg atgctcgtca ggggggcgga gcctatggaa aaacgccagc aacgcggcct ttttacggtt cctggccttt tgctggcctt ttgctcacat gttctttcct gcgttatccc ctgattctgt ggataaccgt attaccgcct ttgagtgagc tgataccgct cgccgcagcc gaacgaccga gcgcagcgag tcagtgagcg aggaagcgga agagcgcctg atgcggtatt ttctccttac gcatctgtgc ggtatttcac accgcatata tggtgcactc tcagtacaat ctgctctgat gccgcatagt taagccagta tacactccgc tatcgctacg tgactgggtc atggctgcgc cccgacaccc gccaacaccc gctgacgcgc cctgacgggc ttgtctgctc ccggcatccg cttacagaca agctgtgacc gtctccggga gctgcatgtg tcagaggttt tcaccgtcat caccgaaacg cgcgaggcag ctgcggtaaa gctcatcagc gtggtcgtga agcgattcac agatgtctgc ctgttcatcc gcgtccagct cgttgagttt ctccagaagc gttaatgtct ggcttctgat aaagcgggcc atgttaaggg cggttttttc ctgtttggtc actgatgcct ccgtgtaagg gggatttctg ttcatggggg taatgatacc gatgaaacga gagaggatgc tcacgatacg ggttactgat gatgaacatg cccggttact ggaacgttgt gagggtaaac aactggcggt atggatgcgg cgggaccaga gaaaaatcac tcagggtcaa tgccagcgct tcgttaatac agatgtaggt gttccacagg gtagccagca gcatcctgcg atgcagatcc ggaacataat ggtgcagggc gctgacttcc gcgtttccag actttacgaa acacggaaac cgaagaccat tcatgttgtt gctcaggtcg cagacgtttt gcagcagcag tcgcttcacg ttcgctcgcg tatcggtgat tcattctgct aaccagtaag gcaaccccgc cagcctagcc gggtcctcaa cgacaggagc acgatcatgc gcacccgtgg ccaggaccca acgctgcccg agatgcgccg cgtgcggctg ctggagatgg cggacgcgat ggatatgttc tgccaagggt tggtttgcgc attcacagtt ctccgcaaga attgattggc tccaattctt ggagtggtga atccgttagc gaggtgccgc cggcttccat tcaggtcgag gtggcccggc tccatgcacc gcgacgcaac gcggggaggc agacaaggta tagggcggcg cctacaatcc atgccaaccc gttccatgtg ctcgccgagg cggcataaat cgccgtgacg atcagcggtc cagtgatcga agttaggctg gtaagagccg cgagcgatcc ttgaagctgt ccctgatggt cgtcatctac ctgcctggac agcatggcct gcaacgcggg catcccgatg ccgccggaag cgagaagaat cataatgggg aaggccatcc agcctcgcgt cgcgaacgcc agcaagacgt agcccagcgc gtcggccgcc atgccggcga taatggcctg cttctcgccg aaacgtttgg tggcgggacc agtgacgaag gcttgagcga gggcgtgcaa gattccgaat accgcaagcg acaggccgat catcgtcgcg ctccagcgaa agcggtcctc gccgaaaatg acccagagcg ctgccggcac ctgtcctacg agttgcatga taaagaagac agtcataagt gcggcgacga tagtcatgcc ccgcgcccac cggaaggagc tgactgggtt gaaggctctc aagggcatcg gtcgacgctc tcccttatgc gactcctgca ttaggaagca gcccagtagt aggttgaggc cgttgagcac cgccgccgca aggaatggtg catgcaagga gatggcgccc aacagtcccc cggccacggg gcctgccacc atacccacgc cgaaacaagc gctcatgagc ccgaagtggc gagcccgatc ttccccatcg gtgatgtcgg cgatataggc gccagcaacc gcacctgtgg cgccggtgat gccggccacg atgcgtccgg cgtagaggat cgagatctcg atcccgcgaa at