BuamA.00119.a
D-alanine--D-alanine ligase
CENTER ID:
BuamA.00119.a
ORGANISM:
Burkholderia ambifaria MC40-6
ASSOCIATED DISEASE:
CURRENT STATUS:
in PDB
COMMUNITY REQUEST:
True
NIH RISK GROUP:
3
SELECT AGENT:
False
NIH PRIORITY
pathogens category:
IIIB
Ordering Clones & Proteins
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Clones*
CENTER REFERENCE ID
DOMAIN/REGION DESCRIPTION
INFO
AA START
AA STOP
ORDER MATERIAL
BuamA.00119.a.A1.GE33135
Full length( BuamA.00119.a )
info
1
313
BuamA.00119.a.A1.GE33135
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis . Get sequence information
using the button in the "info" column.
Proteins
CENTER REFERENCE ID
DOMAIN/REGION DESCRIPTION
INFO
AA START
AA STOP
ORDER MATERIAL
BuamA.00119.a.A1.PS01235
Full length( BuamA.00119.a )
info
1
313
PS01235
Structures
4EG0
DEPOSITED: 3/30/2012
DETERMINATION: XRay
CLONE: BuamA.00119.a.A1.GE33135
PROTEIN: BuamA.00119.a.A1.PS01236
Publications by SSGCID
Combining functional and structural genomics to sample the essential Burkholderia structome.
Abendroth J, Armour B, Barrett L, Baugh L, Begley DW, Buchko GW, Choi R, Clifton MC, Dieterich SH, Dranow DM, Edwards TE, Fairman JW, Fox D, Gallagher LA, Gardberg AS, Gillespie A, Manoil C, Myler PJ, Nakazawa-Hewitt S, Napuli A, Nguyen MT, Patrapuvich R, Phan I, Stacy R, Staker BL, Stewart LJ, Van Voorhis WC
PLoS ONE - 2012
volume 8, issue 1, pages e53851
PDB:
3D63 ,
3DAH ,
3EIZ ,
3EJ2 ,
3EK2 ,
3EZO ,
3F0F ,
3FTP ,
3GK0 ,
3GK3 ,
3GVF ,
3GWA ,
3GWE ,
3IML ,
3SZ8 ,
3T4C ,
3TML ,
3TMQ ,
3TXY ,
3U7J ,
3UE9 ,
3UK1 ,
3UK2 ,
3UND ,
3UPT ,
3URR ,
3UW1 ,
3UW2 ,
3UW3 ,
3V2I ,
3V7N ,
3V8H ,
3V9O ,
3V9P ,
3VAV ,
4DDO ,
4DFE ,
4DHE ,
4DHK ,
4DUT ,
4DZ4 ,
4E4T ,
4E51 ,
4EFI ,
4EG0 ,
4EGJ ,
4EK2 ,
4EQY ,
4EWG ,
4EX5 ,
4EXQ ,
4F2G ,
4F32 ,
4F3N ,
4F3Y ,
4F4H ,
4F7D ,
4FK8 ,
4FRY ,
4G1K ,
4G67 ,
4G6Z ,
4GHK ,
4H3Y ,
4H3Z ,
4H4G
Sequences
These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols.
To find the specific sequence of any material you may have ordered, click on the "info" button next to the name of that material.
AA Sequence
MSGIDPKRFG KVAVLFGGES AEREVSLTSG RLVLQGLRDA GIDAHPFDPA ERPLSALKDE GFVRAFNALH GGYGENGQIQ GALDFYGIRY TGSGVLGSAL GLDKFRTKLV WQQTGVPTPP FETVMRGDDY AARATDIVAK LGLPLFVKPA SEGSSVAVLK VKTADALPAA LSEAATHDKI VIVEKSIEGG GEYTACIAGD LDLPLIKIVP AGEFYDYHAK YVANDTQYLI PCGLPAEQET ELKRIARRAF DVLGCTDWGR ADFMLDAAGN AYFLEVNTAP GMTDHSLPPK AARSIGIGYS ELVVKVLSLT LND
NT Sequence
ATGAGCGGGA TCGATCCGAA ACGTTTCGGC AAGGTGGCAG TGTTGTTCGG CGGCGAATCC GCCGAGCGCG AGGTGTCGCT CACCTCGGGC CGCCTCGTGC TGCAGGGCCT GCGCGACGCG GGCATCGACG CGCATCCGTT CGACCCGGCC GAGCGGCCGC TGTCGGCGCT GAAGGATGAA GGCTTCGTGC GCGCGTTCAA CGCGCTGCAC GGCGGCTATG GCGAGAACGG CCAGATCCAG GGCGCGCTCG ATTTCTACGG GATTCGCTAC ACGGGCAGCG GCGTGCTCGG CTCGGCGCTT GGTCTCGACA AGTTCCGCAC GAAGCTCGTG TGGCAGCAGA CGGGCGTGCC GACGCCGCCG TTCGAGACGG TGATGCGCGG CGACGACTAC GCGGCGCGCG CGACGGACAT CGTCGCGAAG CTCGGCCTGC CGCTGTTCGT GAAGCCGGCG AGCGAAGGCT CGAGCGTCGC GGTGCTGAAG GTCAAGACGG CCGACGCGTT GCCCGCCGCA CTGTCGGAAG CCGCGACGCA CGACAAGATC GTGATCGTCG AGAAGAGCAT CGAAGGCGGC GGCGAATACA CCGCGTGCAT CGCCGGCGAT CTCGATCTCC CGCTGATCAA GATCGTGCCG GCGGGCGAGT TCTACGACTA CCACGCGAAG TATGTCGCCA ACGATACGCA GTACCTGATT CCGTGCGGGC TGCCGGCGGA GCAGGAAACA GAACTGAAGC GCATCGCGCG CCGCGCGTTC GACGTGCTCG GCTGCACCGA CTGGGGCCGC GCGGATTTCA TGCTCGACGC CGCCGGCAAC GCGTATTTCC TGGAAGTGAA CACGGCCCCC GGGATGACCG ACCATTCGCT GCCGCCGAAG GCCGCGCGCT CGATCGGCAT CGGCTATTCG GAGCTGGTCG TGAAGGTGCT GTCGCTTACG CTCAACGAC
Details for BuamA.00119.a.A1.GE33135
HARVESTED ON:
8/19/2011
SEQUENCED ON:
8/31/2011
EXPECTED MW:
35kDa
OBSERVED MW:
35kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Too many to count (100+)
TOTAL EXPRESSION LEVEL:
Moderate Expression
SOLUBLE EXPRESSION LEVEL
High Expression
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
pass with incomplete coverage
PERCENT IDENTITY:
100
PERCENT COVERAGE:
93
Details for BuamA.00119.a.A1.PS01235
PURIFICATION DATe:
10/13/2011
CONCENTRATION:
70.65mg/ml
OBSERVED MW:
data unavailable
EXPRESSION LEVEL:
High Expression
PROTEIN PURIFICATION BUFFER:
20 mM HEPES, pH 7.0, 300 mM NaCl, 5% glycerol and 1 mM TCEP
EXPRESSION HOST:
data unavailable
VIAL COUNT (approx.):
2
VIAL VOLUME:
200µl
PERCENT IDENTITY:
100
PERCENT COVERAGE:
93