BebaC.18655.a
Spike glycoprotein
| CENTER ID: | BebaC.18655.a |
| ORGANISM: | Betacoronavirus Rhinolophus bat clade 3 sarbecovirus PRD-0038 |
| ASSOCIATED DISEASE: | |
| CURRENT STATUS: | in PDB |
| COMMUNITY REQUEST: | False |
| NIH RISK GROUP: | 2 |
| SELECT AGENT: | False |
| NIH PRIORITY pathogens category: |
IIIC |
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Structures
8U29
DEPOSITED: 9/5/2023
DETERMINATION: CryoEM
CLONE: BebaC.18655.a.PK11.GE45344
PROTEIN: BebaC.18655.a.PK11.PE00070
8U0T
DEPOSITED: 8/29/2023
DETERMINATION: CryoEM
CLONE: BebaC.18655.a.HV2.GE45343
PROTEIN: BebaC.18655.a.HV2.PS38733
Publications by SSGCID
Broad receptor tropism and immunogenicity of a clade 3 sarbecovirus
Veesler D, Park YJ, Corti D, King NP, Starr T, Quispe J, Zepeda S, Stewart C, Lee J, Taylor AL, Leaf EM, Treichel C
Cell Host Microbe - 2023
volume 31, issue 12, pages 1961-1973
PMID: 37989312; PMCID: PMC10913562
Sequences
These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols.
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AA Sequence
QEGCGILSNK SKPALTQYSS SRRGFYYFDD TFRSSVRVLT TGYFLPFNSN LTGYSSRNAV TGRLIQFDNP NIPFKDGLYF AATERSNVIR GWIFGSTLDN TTQSAVLFNN GTHIVINVCN FYFCQDPMLT VANGSHYKSW VFLNATNCTY NRVHAFEIDP SLNTGAFIHL REHVFRNVDG FLYVYHNYER ANVYDNFPSG FSVLKPILKL PFGLNITQFK VIMTLFSPTT SSFNADASVY FVGHLKPLTM LAEFDENGTI TDAVDCSQDP LSELKCTTKS LTVEKGIYQT SNFRVSPSTE VVRFPNITNL CPFGQVFNAS KFPSVYAWER LRISDCVADY SVLYNSSSSF STFKCYGVSP TKLNDLCFSS VYADYFVVKG DDVRQIAPAQ TGVIADYNYK LPDDFTGCVL AWNTNSVDSK QGNNFYYRLF RHGKIKPYER DISNVLYNSA GGTCSSTSQL GCYEPLKSYG FTPTVGVGYQ PYRVVVLSFE LLNAPATVCG PKKSTELVKN KCVNFNFNGL TGTGVLTSST KKFQPFQQFG RDVSDFTDSV RDPKTLEILD ISPCSYGGVS VITPGTNTSK AVAVLYQDVN CTDVPTMLHV EQVSTDWRVY ALSADGNMFQ TQAGCLVGAT YENSTYECDI PIGAGICAKF GSNKLRLESI VAYTMSIGED QSIAYSNNTI AIPTNFSISV TTEVLPVSMT KTSVDCNMYI CGDSTECSNL LLQYGSFCTQ LNRALSGIAV EQDRNTRDVF AQTKAIYKTP NIKDFGGFNF SQILPDPKKP SYRSPIEDLL YNKVTLSDPG FMKQYGDCLG GINARDLICA QKFNGLTVLP PLLTDDMIAA YTAALISGTA TAGYTFGAGA ALQIPFPMQM AYRFNGIGVT QNVLYENQKQ IANQFNNAIS KIQDSLTTTP AALGKLQDVI NQNAVALNTL VKQLSSNFGA ISSVLNDILS RLDPPEAEVQ IDRLITGRLQ SLQTYVTQQL IRAAEIRASA NLAATKMSEC VLGQSKRVDF CGKGYHLMSF PQAAPHGVVF LHVTYVPSQQ QNFTTAPAIC HNGKAYFPRE GVFVMNGTHW FITQRNFYSP QVITTDNTFE SGSCDVVIGI VNNTVYDPLQ PELESFKQEL DKYFKNHTSP DVDLGDISGI NASVVDIKKE IAHLNEIAKN LNESLIDLQE LGKYEQYVK
NT Sequence
CAGGAGGGGT GTGGCATACT TTCCAACAAA TCGAAGCCCG CACTGACCCA GTATTCTAGC TCCCGCCGGG GTTTTTATTA CTTCGATGAC ACTTTCCGCA GTTCCGTCAG AGTCCTTACG ACAGGATATT TTCTTCCCTT CAACTCCAAC TTGACGGGTT ACTCCAGCCG TAACGCTGTG ACCGGGAGGC TGATCCAGTT CGATAATCCG AACATTCCAT TCAAGGATGG TCTCTATTTC GCTGCCACCG AACGTAGCAA TGTGATCCGC GGCTGGATTT TCGGGAGCAC CCTTGATAAC ACCACGCAGT CTGCCGTGCT GTTCAATAAC GGTACCCACA TCGTTATCAA CGTTTGTAAC TTCTACTTTT GCCAGGACCC TATGCTGACC GTGGCCAACG GCTCCCACTA TAAATCCTGG GTCTTTCTGA ACGCTACCAA CTGTACTTAC AACCGCGTTC ACGCCTTTGA GATCGATCCC AGTCTGAACA CCGGCGCGTT TATCCACCTG CGCGAGCATG TGTTCAGGAA CGTGGATGGA TTCCTGTACG TGTATCACAA CTATGAGCGT GCGAACGTCT ACGACAACTT CCCGTCCGGC TTCAGCGTGC TGAAGCCCAT CCTGAAGCTT CCCTTCGGTC TGAACATCAC ACAGTTCAAG GTCATCATGA CCTTGTTCTC CCCCACGACT TCCAGCTTCA ACGCAGATGC CTCGGTGTAT TTCGTCGGCC ACCTGAAGCC ACTGACCATG TTGGCTGAGT TCGACGAAAA CGGAACGATC ACTGACGCCG TGGACTGCTC ACAGGATCCT CTGTCTGAGT TGAAGTGTAC CACTAAATCT CTCACCGTGG AGAAGGGCAT TTACCAGACC AGCAACTTCC GTGTGTCACC CAGTACCGAG GTTGTGCGCT TCCCTAACAT CACTAATCTT TGTCCATTCG GCCAGGTGTT TAACGCCAGC AAGTTCCCCT CTGTGTACGC ATGGGAAAGG CTCCGCATTT CTGATTGTGT AGCTGATTAC AGTGTCCTGT ACAATTCTTC ATCGTCCTTC TCTACATTCA AGTGCTACGG TGTTAGCCCG ACTAAGCTGA ACGATCTGTG TTTCTCTTCG GTGTACGCTG ACTACTTCGT AGTGAAGGGC GATGACGTGA GGCAGATCGC CCCGGCCCAA ACCGGCGTTA TTGCAGACTA TAATTATAAG CTCCCAGATG ACTTCACAGG GTGCGTTCTG GCGTGGAATA CCAACTCTGT CGACAGCAAA CAGGGCAATA ACTTCTATTA CCGCCTCTTC AGGCACGGAA AGATTAAGCC CTACGAGCGT GACATCAGCA ATGTCCTGTA CAATTCAGCC GGAGGCACCT GCAGTTCGAC ATCGCAGCTG GGTTGCTACG AACCGCTGAA GAGTTATGGA TTCACCCCAA CCGTTGGTGT AGGGTACCAG CCCTACCGCG TGGTCGTGCT GAGTTTCGAG CTCCTGAATG CTCCCGCCAC CGTGTGCGGC CCAAAGAAAT CCACCGAACT GGTCAAGAAC AAGTGTGTTA ACTTCAATTT CAACGGGCTG ACCGGAACCG GTGTGCTGAC TAGCTCGACC AAAAAGTTTC AGCCTTTTCA ACAGTTCGGG CGCGATGTTT CTGATTTCAC AGACTCCGTA CGTGACCCCA AGACACTCGA GATTCTGGAC ATTTCTCCAT GTTCATACGG AGGCGTTTCC GTTATCACTC CCGGCACCAA TACATCCAAG GCTGTGGCAG TGCTGTACCA AGACGTGAAC TGTACTGACG TGCCAACCAT GCTGCACGTG GAGCAGGTGA GCACAGATTG GCGCGTGTAT GCGCTGAGTG CCGACGGAAA TATGTTCCAG ACTCAGGCTG GTTGCCTCGT TGGGGCCACT TATGAGAACT CCACCTATGA GTGTGACATA CCCATCGGAG CCGGTATCTG TGCTAAGTTC GGTAGCAACA AGCTGAGGCT AGAGTCCATC GTCGCCTATA CAATGTCTAT TGGTGAGGAT CAGTCTATCG CTTACTCCAA CAATACTATC GCTATCCCCA CTAACTTTTC CATTTCTGTT ACCACTGAGG TGTTGCCAGT GTCCATGACG AAGACCTCCG TGGATTGCAA CATGTACATC TGCGGCGACT CCACTGAGTG CAGCAATCTG CTACTCCAAT ACGGATCCTT CTGCACCCAG CTCAACAGGG CCCTCTCCGG TATAGCGGTG GAGCAGGATA GAAACACTCG TGACGTCTTT GCGCAGACTA AGGCCATTTA TAAGACCCCC AACATCAAAG ATTTCGGTGG GTTCAACTTT TCCCAGATTC TGCCTGACCC TAAAAAGCCA AGTTACAGAA GCCCCATCGA GGATCTGCTC TATAATAAAG TTACCTTGTC AGACCCCGGA TTCATGAAGC AGTACGGCGA CTGCCTCGGG GGAATAAACG CGCGCGACCT GATCTGTGCC CAGAAGTTTA ACGGCTTGAC GGTTCTGCCA CCTTTACTGA CAGATGACAT GATCGCTGCC TACACCGCCG CGCTGATTTC TGGCACAGCC ACCGCCGGCT ACACGTTCGG CGCGGGCGCC GCTCTTCAGA TACCCTTCCC TATGCAGATG GCCTATAGAT TCAACGGCAT TGGAGTAACC CAGAATGTGC TGTACGAAAA TCAAAAGCAG ATCGCGAACC AGTTCAACAA TGCCATCTCA AAGATCCAGG ACTCGCTTAC TACCACGCCA GCCGCGCTGG GCAAGCTGCA GGACGTGATC AACCAGAACG CCGTAGCTCT GAACACCCTG GTTAAGCAGC TGTCCAGCAA CTTTGGTGCC ATTTCTTCCG TTCTGAACGA TATTCTCTCC CGTCTCGATC CCCCGGAAGC TGAAGTGCAA ATTGACAGAC TGATCACAGG TAGACTGCAG TCCCTGCAGA CCTACGTGAC CCAACAGCTG ATTCGCGCGG CTGAGATCCG CGCCTCTGCC AACCTGGCCG CTACTAAAAT GAGCGAGTGC GTGCTGGGCC AGAGTAAGAG AGTGGACTTC TGTGGCAAGG GGTACCATCT AATGAGCTTC CCCCAGGCCG CGCCCCACGG GGTTGTGTTC CTGCATGTCA CCTACGTGCC AAGCCAGCAA CAGAACTTCA CCACTGCCCC AGCGATCTGT CATAACGGTA AGGCTTATTT TCCTCGGGAA GGCGTATTCG TCATGAACGG TACCCACTGG TTCATCACAC AGCGCAATTT CTACTCACCG CAGGTGATCA CCACTGATAA CACCTTCGAG TCTGGGTCGT GTGATGTAGT CATCGGCATC GTGAATAACA CCGTGTATGA CCCACTGCAA CCCGAGCTTG AATCTTTCAA GCAGGAACTG GACAAGTACT TCAAGAACCA TACCAGCCCC GACGTCGACC TGGGTGACAT CTCTGGGATT AACGCGTCCG TAGTGGACAT CAAAAAGGAA ATCGCTCACC TCAACGAAAT CGCTAAGAAC CTGAACGAGT CACTGATCGA CTTGCAGGAG CTGGGTAAGT ACGAGCAGTA TGTTAAG