BaquA.17833.b
VompD
CENTER ID:
BaquA.17833.b
ORGANISM:
Bartonella quintana Toulouse
ASSOCIATED DISEASE:
CURRENT STATUS:
in PDB
COMMUNITY REQUEST:
True
NIH RISK GROUP:
3
SELECT AGENT:
False
NIH PRIORITY
pathogens category:
I
Ordering Clones & Proteins
If there are materials available for this target, they will be listed below.
Materials can be ordered from SSGCID using the button in the "order material" column.
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Clones*
CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO
AA
START
AA
STOP
ORDER
MATERIAL
BaquA.17833.b.B10.GE37342
VompD:aa52-375 (MV:239-333)
info
52
375
BaquA.17833.b.B10.GE37342
BaquA.17833.b.B11.GE37343
VompD:aa144-332 (MV:239-333)
info
144
332
BaquA.17833.b.B11.GE37343
BaquA.17833.b.B2.GE36657
mature protein, soluble domain
info
33
853
BaquA.17833.b.B2.GE36657
BaquA.17833.b.B2.GE37344
mature protein, soluble domain
info
33
853
BaquA.17833.b.B2.GE37344
BaquA.17833.b.B4.GE36659
VompD:aa214-340 (MV:239-333)
info
214
340
BaquA.17833.b.B4.GE36659
BaquA.17833.b.B9.GE36836
VompD:aa715-808
info
715
808
BaquA.17833.b.B9.GE36836
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis . Get sequence information
using the button in the "info" column.
Proteins
CENTER REFERENCE ID
DOMAIN/REGION DESCRIPTION
INFO
AA START
AA STOP
ORDER MATERIAL
BaquA.17833.b.B4.PW37282
VompD:aa214-340 (MV:239-333)
info
214
340
PW37282
BaquA.17833.b.B9.PW37313
VompD:aa715-808
info
715
808
PW37313
Structures
4LGO
DEPOSITED: 6/28/2013
DETERMINATION: XRay
CLONE: BaquA.17833.b.B4.GE36659
PROTEIN: BaquA.17833.b.B4.PW37282
External Resources
RESOURCE
REFERENCE ID
UniProt:
Q64HT0
Sequences
These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols.
To find the specific sequence of any material you may have ordered, click on the "info" button next to the name of that material.
AA Sequence
MKKLYSTQNW AKVASLGTAM AALLSGVSPV FAAGVSITEG FVRNSSGTDG PYPKRSYASI VFAGDDNYCG VDNVIGRGGS TQGSNNQITA EEQYNRFIED RTFNGRNPYS TTTEKVTWVK DGVLSNNSGS YMGTATGGLQ SALPEAYGVY SFATGCGFSA TGNYSTAFGA EATGKAGGAQ AFSVGDTEND ITRQITGVAA GTSGTDAMNV APLKAMKDLV VGAWKLVVND ENPIDVNAGS TVKFVGVKAE EGNEDSKNIK ITTGNNNEVK FDLNDIIRVK RVIAGKANVS EVGFVITGGP NMTVGGINAG NKKITGVANG IRENDAVNVS QLNELKNQIA GGSLVNWLEG QKLITVGAEK GGTEINIAGS EGNRTIAGVK AAEKDNEAVN KKQLDDHIAD ITDIINNIKT ESAFAVLYDK NGDNTVNYNS VTLGGGKSDG PVALLNVKDG KITKESHDAI NGSQINKISG DIAKFFGGDA AFEGGVFAGP RYNLSEVFAD GNVKQKVFED VGSALTGLDM NVRSVNNRLT YVANSVDQQI ENFSKNALIW SDTENAFVAL HTNDGNKTES KITYLLDGDI SKASTDAING SQLYMMSNKL AAYFGGGAGY ENGQWSDPTF MLQQLNPDGS VVEKNYKTVA DAFGSVDSSL SNLNNRLKAV EQGASPVPPS SDSDVLHWNE EKGGYDASHK GQPGKITEVA EGNIAQGSKD AVNGGQLWET NERLSGVEKD VQHISDRVDN ISNTIADIGD IVNNMADGAV SYDRDEHGNK TNKISLQGGN AGEPVVIDNV ADGKIEKGSK EAVNGGQLHD YTEQQMKVVL DDAKKYTDER IKNITVDAID DAVSQAKDYT DMRFEALNYG IEGARKEARQ AAAIGLAVSN LRYNDTPGKL SIAFGSGLWR SQGAFAFGAG YTSESGAIRS NLSVTSSGGH WGIGAGLGLT LN
NT Sequence
atgaaaaaat tatattcaac acaaaattgg gctaaagttg cctcattggg aacggcaatg gcagcgctct tatcgggtgt ctctcctgtt ttcgctgcgg gtgtttccat aacagaagga tttgttcgaa attcgagtgg cactgatggt ccttatccaa aaaggagtta tgccagtatt gtttttgctg gtgatgataa ttactgtggt gtagataatg ttattggtcg tggtggcagt actcagggct ctaataatca aataacggca gaggagcaat ataacagatt tatcgaagat agaacattta atggccgcaa cccttatagc acaaccactg aaaaagttac ttgggttaaa gatggagtct tgagtaacaa cagtggtagt tatatgggaa cagccactgg tggtcttcag agtgctctac ctgaggctta tggtgtttat tcttttgcta ccggttgtgg attttctgcg acgggaaact attcaacagc gtttggtgca gaagcgacgg gaaaggctgg tggcgcgcaa gcttttagtg ttggcgatac tgagaatgat ataacacgac aaattacagg agtggcagca gggacctctg gtaccgatgc aatgaatgtg gcaccgctaa aagctatgaa agatttggta gtaggagctt ggaaacttgt tgttaacgat gaaaatccta tagatgttaa tgcaggcagt acagtaaaat ttgtaggtgt taaggccgaa gagggtaatg aagatagtaa aaatatcaaa attaccacag gaaataataa tgaggtaaaa tttgatctaa atgatattat cagagttaaa cgtgtaatag caggcaaggc gaacgtaagt gaagtgggtt ttgtgattac tggtggccca aacatgactg ttggtggtat taatgccgga aataaaaaaa ttacaggagt agcaaatggt attcgagaga atgatgcagt aaatgtttca cagttgaacg aactaaaaaa tcaaatagca ggaggtagtc ttgttaattg gttggaaggg cagaagctta ttactgttgg tgctgaaaaa ggtggcacgg aaattaatat tgcaggcagt gaaggaaatc ggactatcgc cggtgtgaaa gcagcagaaa aagataatga agctgttaat aaaaaacagc ttgatgacca tattgcagat attactgata ttattaacaa tattaagaca gaaagtgctt ttgcggttct ctatgataaa aatggtgata acaccgttaa ttataatagt gtgactttgg gcgggggtaa gagcgatgga cccgttgctc tccttaatgt caaagatggc aaaattacca aagaatcgca tgatgcaatc aatggtagcc aaattaataa gatatctgga gatattgcaa aattttttgg cggtgatgcg gcatttgaag gtggtgtctt tgcgggccct agatataatt tatctgaagt ttttgcagat ggtaatgtaa aacaaaaggt ctttgaagat gttggctcag cgttgacagg gcttgatatg aatgtcagaa gtgtgaataa ccgtctaaca tatgtagcca atagcgttga tcagcaaatt gaaaattttt ctaaaaatgc tttaatatgg agcgatactg agaatgcctt tgttgcgctt catacaaacg acggaaacaa aacggagagt aagattacct atcttttgga tggtgacatt agtaaagctt caacagatgc cataaatggt tctcagcttt atatgatgag caataagctt gctgcttatt ttggtggcgg tgctggatat gagaatgggc agtggtcgga tccaacattt atgcttcagc aattgaatcc tgatggtagt gttgttgaga agaactataa gactgtagcg gatgcttttg gtagtgttga tagcagtttg tctaatctca ataatcgttt gaaggctgtt gaacaagggg catctccggt acctccgtct tctgattctg atgtgttaca ttggaatgaa gagaaagggg ggtatgatgc gagccataag ggtcaacctg gtaagattac ggaagtagct gagggtaata ttgcgcaagg ttcgaaagat gcagtcaatg gtggacagct ttgggaaacc aatgagcgtc tctctggtgt tgaaaaagat gttcagcata tttcagacag agtggacaat atttccaata cgattgctga tattggtgat atagttaaca acatggctga tggtgctgtt agctatgacc gagatgagca tgggaataaa acgaataaaa tcagtttaca aggtggtaat gctggtgaac ctgtggtgat agataatgtt gcggatggta agatagagaa gggttcgaaa gaagcggtga atggtggtca gttgcatgac tatacggaac aacagatgaa ggttgttctt gatgatgcga aaaaatatac ggatgaacgt atcaagaata tcactgttga tgccattgat gatgctgttt ctcaagctaa agactataca gatatgaggt ttgaggcttt aaattatggc attgagggtg cccggaaaga agcgaggcaa gcagcggcta taggtttagc ggtatctaac ttacgttaca atgatacacc tggaaaatta agcattgcat ttgggagcgg cttatggcgt agtcaaggtg catttgcctt tggtgcgggg tatacatctg aaagtggggc tattcggtcc aatttatctg tcaccagttc tggtggtcat tggggaatag gtgctggatt aggtttaaca ctgaattga
Details for BaquA.17833.b.B10.GE37342
HARVESTED ON:
9/27/2013
SEQUENCED ON:
10/28/2013
EXPECTED MW:
35kDa
OBSERVED MW:
35kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Too many to count (100+)
TOTAL EXPRESSION LEVEL:
Low Expression
SOLUBLE EXPRESSION LEVEL
Low Expression
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
pass with incomplete coverage
PERCENT IDENTITY:
99
PERCENT COVERAGE:
100
Details for BaquA.17833.b.B11.GE37343
HARVESTED ON:
9/27/2013
SEQUENCED ON:
10/3/2013
EXPECTED MW:
20kDa
OBSERVED MW:
20kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Too many to count (100+)
TOTAL EXPRESSION LEVEL:
Low Expression
SOLUBLE EXPRESSION LEVEL
Low Expression
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
pass
PERCENT IDENTITY:
99
PERCENT COVERAGE:
100
Details for BaquA.17833.b.B2.GE36657
HARVESTED ON:
2/27/2013
SEQUENCED ON:
2/2/2013
EXPECTED MW:
89kDa
OBSERVED MW:
89kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Too many to count (100+)
TOTAL EXPRESSION LEVEL:
Moderate Expression
SOLUBLE EXPRESSION LEVEL
Insoluble
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
pass with incomplete coverage
PERCENT IDENTITY:
100
PERCENT COVERAGE:
36
Details for BaquA.17833.b.B2.GE37344
HARVESTED ON:
9/27/2013
SEQUENCED ON:
10/3/2013
EXPECTED MW:
88kDa
OBSERVED MW:
88kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Too many to count (100+)
TOTAL EXPRESSION LEVEL:
High Expression
SOLUBLE EXPRESSION LEVEL
Insoluble
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
pass with incomplete coverage
PERCENT IDENTITY:
100
PERCENT COVERAGE:
36
Details for BaquA.17833.b.B4.GE36659
HARVESTED ON:
2/27/2013
SEQUENCED ON:
2/2/2013
EXPECTED MW:
15kDa
OBSERVED MW:
13kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Too many to count (100+)
TOTAL EXPRESSION LEVEL:
Low Expression
SOLUBLE EXPRESSION LEVEL
Moderate Expression
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
pass
PERCENT IDENTITY:
100
PERCENT COVERAGE:
100
Details for BaquA.17833.b.B9.GE36836
HARVESTED ON:
5/1/2013
SEQUENCED ON:
5/8/2013
EXPECTED MW:
11kDa
OBSERVED MW:
11kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Too many to count (100+)
TOTAL EXPRESSION LEVEL:
Low Expression
SOLUBLE EXPRESSION LEVEL
Moderate Expression
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
pass
PERCENT IDENTITY:
100
PERCENT COVERAGE:
100
Details for BaquA.17833.b.B4.PW37282
PURIFICATION DATe:
4/29/2013
CONCENTRATION:
28.1mg/ml
OBSERVED MW:
14kDa
EXPRESSION LEVEL:
Low Expression
PROTEIN PURIFICATION BUFFER:
25 mM HEPES pH 7.0, 500 mM NaCl, 5% Glycerol , 2 mM DTT, and 0.025% Azide
EXPRESSION HOST:
data unavailable
VIAL COUNT (approx.):
16
VIAL VOLUME:
110µl
PERCENT IDENTITY:
100
PERCENT COVERAGE:
100
Details for BaquA.17833.b.B9.PW37313
PURIFICATION DATe:
6/17/2013
CONCENTRATION:
25mg/ml
OBSERVED MW:
12kDa
EXPRESSION LEVEL:
Low Expression
PROTEIN PURIFICATION BUFFER:
25 mM HEPES pH 7.0, 500 mM NaCl, 5% Glycerol , 2 mM DTT, and 0.025% Azide
EXPRESSION HOST:
data unavailable
VIAL COUNT (approx.):
6
VIAL VOLUME:
110µl
PERCENT IDENTITY:
100
PERCENT COVERAGE:
100