ArlaA.20519.a

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

CENTER ID: ArlaA.20519.a
ORGANISM: Arenavirus Lassa virus Mouse/Sierra Leone/Josiah/1976
ASSOCIATED DISEASE: Lassa fever
CURRENT STATUS: expressed
COMMUNITY REQUEST: True
NIH RISK GROUP: 2
SELECT AGENT: True
NIH PRIORITY
pathogens category:
IIIA

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External Resources
RESOURCE REFERENCE ID
PATRIC ID: fig|11620.1002.CDS.2
UniProt: O09705
ViPR: link
Sequences
These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols. To find the specific sequence of any material you may have ordered, click on the "info" button next to the name of that material.
AA Sequence
MEEDIACVKD LVSKYLVDNE RLSRQKLAFL VQTEPRMLLM EGLKLLSLCI EVDSCNANGC EHNSEDKSVE RILHDHGILT PSLCLWYPDG YKLTGNVLIL LECFVRSSPA NFEQKYIEDF KKLEQLKEDL KSVDINLIPL IDGRTSFYNE QIPDWVNDKL RDTLFSLLKY AQESNSLFEE SEYSRLCESL FMTSGRLSGV ESLNVLMDNR SNHYEEVIAS CHQGINNKLT AHEVKLQIEE EYQVFRNRLR KGEIEGQFLK VDKSQLLNEL NNLYADKVVA EDNIEHLIYQ FKRASPILRF LYANVDEGNE KRGNQTIGEC QVQCWRSFLN KVKSLRILNT RRKLLLIFDA LILLASKHDL MKQKCLKGWL GSCFLRVKDR LVSLEATKRD LEKWGERGNR LRSRITQSSQ CLSKNQILNS IFQKTILKAT TALKDVGISV DHYKIDMEVI CLNSYDLIMD FDVSGVVPTI SYQRTEEETF PYVMGDVELL GTTDLERLSS LSLALVNSMK TSSTVKLRQN EFGPARYQVV RCKEAYCQEF SLGNTELQLI YQKTGECSKC YAINDNKVGE VCSFYADPKR YFPAIFSAEV LQTTISTMIS WIEDCNELEG QLNNIRSLTK MILVLILAHP SKRSQKLLQN LRYFVMAYLS DYHHKDLIDK IREELITDVE FLLYRLIRTL MNLVLSEDVK SMMTNRFKFI LNVSYMCHFI TKETPDRLTD QIKCFEKFLE PKVRFGHVST NPADTATEEE LDDMVYNAKK FLSKDGCTTI EGPDYKRPGV SKKYLSLLTS SFNNGSLFKE REVKREIKDP LITSGSAALD LASKKSVVVN KYTDGSRILN YDFNKLTALA VSQLTEVFSR KGKYLLNKQD YEYKVQQAMS NLVLGSGQLK SDADGADLDE ILLDGGASDY FDQLKETVEK IVDQYREPVK LGSGPNGDGQ PSINDLDEIV SNKFYIRLIK GELSNHMVEE FDHDILPGKF YEEFCNAVYE NSRLKQKYFY CGHMSQCPIG ELTKAVSTRT YFNHEYFQCF KSILLIMNAN TLMGRYTHYK SRNLNFKFDM GKLSDDVRIS ERESNSEALS KALSLTNCTT AMLKNLCFYS QESPQSYDSV GPDTGRLKFS LSYKEQVGGN RELYIGDLRT KMFTRLIEDY FEAISLQLSG SCLNNEKEFE NAILSMKLNV SLAHVSYSMD HSKWGPMMCP FLFLTVLQNL IFLSKDLQAD IKGRDYLSTL LMWHMHKMVE IPFNVVTAMM KSFIKAQLGL RKKTKQSITE DFFYSNFQAG VVPSHISSIL DMGQGILHNT SDFYALISER FINYAISCIC GGTIDAYTSS DDQISLFDQS LTELLQRDPE EFRTLIEFHY YMSDQLNKFV SPKSVIGRFV AEFKSRFFVW GDEVPLLTKF VAAALHNIKC KEPHQLAETI DTIIDQSVAN GVPVHLCNLI QKRTLNPLQY ARYPIDPFLL NCETDVRDWV DGNRSYRIMR QIEGLIPNAC SKIRSMLRKL YNRLKTGQLH EEFTTNYLSS EHLSSLRNLC ELLDVEPPSE SDLEYSWLNL AAHHPLRMVL RQKIIYSGAV NLDDEKIPTI VKTIQNKLSS TFTRGAQKLL SEAINKSAFQ SSIASGFVGL CRTLGSKCVR GPNKENLYIK SIQSLISDVK GIKLLTNSNG IQYWQVPLEL RNGSGGESVV SYFRPLLWDY MCISLSTAIE LGAWVLGEPK TVKVFDFFKH NPCDYFPLKP TASKLLEDRV GLNHIIHSLR RLYPSVFEKH ILPFMSDLAS TKMKWSPRIK FLDLCVALDV NCEALSLVSH IVKWKREEHY IVLSSELRLS HSRTHEPMVE ERVVSTSDAV DNFMRQIYFE SYVRPFVATT RTLGSFTWFP HKTSVPEGEG LHRMGPFSSF VEKVIHKGVE RPMFKHDLMM GYAWIDFDIE PARFNQNQLI ASGLVDPKFD SLEDFFDAVA SLPPGSAKLS QTVRFRVKSQ DASFKESFAI HLEYTGSMNQ QAKYLVHDVT VMYSGAVSPC VLSDCWRLVL SGPTFKGKSA WYVDTEIINE FLIDTNQLGH VTPVEIVVDM ERLQFTEYDF VLVGPCTEPT PLVVHRGGLW ECGKKLASFT PVIQDQDLEI FVREVGDTSS DLLIGALSDM MIDRLGLRMQ WSGVDIVSTL RAAAPSCEGI LSAVLEAVDN WVEFKGYALC YSKSRGKVMV QSSGGKLRLK GRTCEELTRK DECIEDIE
NT Sequence
ATGGAGGAAG ACATAGCCTG TGTCAAAGAC TTAGTATCAA AATACCTAGT GGACAACGAG AGATTGTCAA GACAGAAGTT AGCATTTCTT GTGCAGACAG AGCCTAGGAT GCTATTAATG GAAGGGTTGA AACTCTTGTC CCTCTGTATT GAGGTTGATT CTTGCAACGC AAATGGTTGC GAGCATAACA GTGAGGACAA ATCTGTGGAA AGAATTCTCC ATGACCATGG AATCTTGACA CCTTCACTAT GTTTGTGGTA CCCGGACGGT TACAAACTGA CGGGCAATGT TCTAATACTG CTGGAGTGTT TTGTTAGATC ATCTCCTGCT AACTTTGAGC AGAAGTACAT TGAGGACTTC AAAAAATTAG AGCAGCTGAA AGAAGACCTG AAGAGTGTCG ACATCAATTT AATACCACTT ATAGACGGGA GAACATCATT CTACAATGAA CAAATACCTG ACTGGGTCAA TGATAAGTTG AGGGATACGC TCTTCTCACT TTTAAAGTAT GCACAGGAGA GTAATTCACT TTTTGAAGAG TCAGAGTATA GCAGACTCTG TGAATCTTTA TTCATGACTT CGGGTAGATT ATCAGGGGTG GAGAGTTTAA ATGTTCTGAT GGACAATCGC TCTAATCATT ATGAGGAAGT GATTGCCTCA TGCCACCAGG GCATCAATAA TAAATTAACA GCTCATGAGG TAAAGCTGCA GATCGAAGAG GAGTATCAAG TGTTTAGGAA CAGATTGAGG AAAGGAGAGA TAGAAGGTCA GTTTTTAAAG GTTGATAAGA GCCAGTTACT TAATGAGCTT AACAATTTGT ACGCTGATAA GGTAGTTGCA GAAGACAATA TCGAACACTT AATTTACCAG TTCAAGAGAG CATCACCAAT ATTGAGATTT TTGTATGCAA ATGTTGATGA GGGGAATGAA AAAAGGGGAA ACCAAACTAT TGGAGAATGT CAGGTTCAAT GCTGGAGATC ATTCCTAAAT AAAGTAAAAT CTTTGAGGAT ATTGAACACA AGGAGGAAAC TTCTATTAAT TTTTGATGCA CTAATTCTCC TTGCAAGTAA GCATGACCTG ATGAAACAAA AGTGTTTAAA AGGGTGGTTG GGGTCTTGCT TCTTAAGAGT TAAAGATAGA CTAGTTTCTT TGGAGGCAAC AAAGAGGGAT CTCGAGAAAT GGGGAGAGCG AGGCAACAGG CTAAGATCTA GAATCACACA GTCCTCCCAG TGTTTGAGTA AGAATCAAAT CCTCAATTCA ATATTCCAGA AAACCATTTT GAAGGCCACC ACTGCTTTAA AGGATGTTGG GATCAGTGTG GACCACTATA AAATTGATAT GGAGGTGATC TGCCTTAACA GCTATGATTT GATTATGGAC TTTGATGTCT CCGGAGTTGT CCCAACAATC AGTTATCAGA GAACAGAGGA AGAAACATTC CCTTATGTGA TGGGGGATGT GGAACTACTG GGAACCACTG ACTTAGAGAG ACTTTCCTCA TTGAGCCTCG CTTTGGTGAA CTCTATGAAA ACTTCTTCTA CCGTAAAGCT GAGACAGAAT GAATTTGGAC CCGCAAGGTA TCAAGTGGTC AGATGCAAAG AAGCATATTG TCAAGAGTTT TCATTGGGTA ACACTGAATT ACAACTGATT TATCAAAAGA CAGGGGAGTG CTCGAAGTGC TATGCTATTA ATGATAACAA AGTTGGTGAG GTGTGCTCAT TTTATGCTGA TCCTAAAAGA TATTTTCCAG CAATATTTTC AGCTGAGGTT TTACAAACAA CAATAAGCAC TATGATTTCT TGGATAGAAG ATTGCAATGA GCTGGAAGGG CAGTTGAACA ATATCAGGTC TCTGACAAAG ATGATCCTGG TTTTAATTTT AGCTCACCCC AGTAAACGTT CTCAAAAGCT CCTCCAAAAT CTTAGGTACT TTGTAATGGC TTATCTATCA GATTATCATC ATAAGGACCT CATTGACAAA ATAAGGGAAG AATTAATCAC TGATGTTGAG TTCCTGCTCT ATAGGTTAAT AAGGACATTA ATGAATCTGG TTTTATCTGA GGATGTGAAG AGCATGATGA CTAATAGGTT CAAGTTCATT TTGAATGTTT CCTACATGTG CCACTTCATT ACGAAAGAAA CACCAGATAG ATTGACAGAT CAGATAAAAT GTTTTGAGAA GTTTCTGGAA CCAAAGGTGA GATTTGGTCA TGTGAGCACT AATCCTGCAG ACACAGCCAC TGAGGAAGAA TTGGATGACA TGGTCTACAA TGCAAAAAAG TTTTTAAGTA AAGATGGATG CACAACTATC GAGGGACCAG ATTATAAAAG GCCTGGTGTT TCAAAGAAGT ATTTATCTCT TCTTACATCC TCTTTTAACA ATGGTTCACT ATTTAAGGAG AGGGAAGTAA AAAGGGAAAT CAAAGATCCT CTCATCACCA GTGGCAGTGC AGCCTTGGAT TTAGCCAGCA AGAAAAGTGT TGTTGTTAAT AAATACACAG ATGGTTCTAG AATATTAAAC TATGACTTCA ATAAGCTCAC AGCACTGGCC GTGTCGCAGC TCACTGAAGT CTTCTCAAGG AAAGGAAAGT ACCTTCTCAA CAAGCAGGAC TATGAGTACA AAGTTCAGCA GGCAATGAGC AATTTGGTTC TAGGATCTGG GCAGCTCAAA AGTGATGCTG ATGGGGCTGA CCTAGACGAA ATTTTGCTCG ATGGAGGTGC AAGCGATTAT TTTGATCAGC TAAAGGAGAC TGTTGAAAAA ATTGTTGATC AGTATAGGGA ACCTGTCAAG CTAGGCTCAG GCCCTAATGG TGATGGCCAA CCATCAATAA ATGATCTAGA TGAGATTGTC TCAAATAAGT TTTACATTAG GTTGATCAAG GGTGAATTAT CCAATCACAT GGTTGAGGAG TTTGATCATG ATATCTTACC AGGTAAATTT TATGAAGAAT TCTGTAATGC TGTCTATGAG AATAGTAGAT TGAAGCAGAA GTATTTTTAC TGTGGACATA TGTCACAGTG TCCTATTGGA GAGTTGACAA AGGCAGTGTC AACAAGGACA TACTTTAACC ATGAATACTT TCAGTGTTTT AAGTCCATAC TCTTGATCAT GAATGCGAAT ACACTTATGG GGAGGTACAC TCATTATAAG TCAAGGAACC TTAATTTCAA GTTTGATATG GGTAAACTCT CTGATGATGT AAGAATTAGT GAAAGGGAGA GCAATTCAGA GGCACTTAGT AAGGCTCTGT CACTGACAAA CTGTACCACA GCAATGTTAA AGAATTTGTG TTTTTATAGC CAAGAGTCGC CACAATCTTA TGACTCAGTG GGACCTGATA CAGGAAGGCT TAAGTTTTCT TTGTCATATA AAGAACAAGT GGGTGGTAAC AGAGAATTAT ATATTGGTGA TCTTAGAACA AAGATGTTTA CTAGACTTAT AGAAGATTAC TTTGAAGCTA TAAGCCTACA GTTATCAGGG AGTTGCCTGA ACAACGAGAA GGAATTTGAA AATGCTATCC TTTCCATGAA ATTGAATGTT TCATTGGCAC ATGTGTCTTA TAGCATGGAT CATAGTAAGT GGGGCCCAAT GATGTGTCCA TTTTTGTTCT TGACTGTCTT ACAGAATTTA ATTTTCCTCT CAAAGGACTT GCAAGCTGAC ATAAAAGGGA GGGACTATCT CTCAACCCTA CTTATGTGGC ATATGCACAA AATGGTGGAA ATACCTTTTA ATGTGGTGAC AGCCATGATG AAGTCTTTCA TTAAAGCCCA ACTAGGGTTA AGGAAGAAAA CTAAACAGTC AATAACAGAA GATTTCTTTT ACTCTAATTT CCAAGCTGGT GTAGTGCCTT CTCACATCAG TTCAATACTT GACATGGGTC AAGGAATATT ACACAACACA TCAGATTTTT ATGCCCTCAT TTCAGAGAGG TTCATTAATT ATGCTATCAG TTGTATATGC GGTGGTACGA TAGATGCTTA TACCTCTAGT GATGATCAGA TTTCTCTCTT TGATCAATCT CTCACAGAGC TTTTGCAAAG AGACCCAGAA GAATTTAGGA CTCTAATAGA GTTCCACTAT TATATGAGTG ATCAACTCAA TAAGTTTGTG AGCCCTAAAA GTGTCATTGG CAGGTTTGTT GCAGAGTTTA AATCTAGATT TTTTGTTTGG GGAGATGAAG TGCCATTATT GACAAAGTTC GTTGCAGCAG CTCTTCACAA TATAAAGTGT AAAGAGCCAC ACCAACTGGC AGAAACAATT GACACAATCA TTGATCAGTC GGTTGCGAAT GGTGTCCCTG TTCACTTATG TAATCTAATA CAGAAAAGAA CCTTAAATCC TTTGCAATAT GCAAGATACC CTATTGACCC ATTCTTATTG AATTGCGAGA CAGATGTTAG AGACTGGGTA GATGGCAACC GTAGTTATAG GATTATGAGG CAAATAGAGG GATTGATTCC TAATGCTTGC AGCAAGATTA GATCTATGTT AAGAAAACTG TACAATAGGT TGAAGACTGG GCAACTCCAT GAAGAGTTCA CAACAAACTA TTTGTCTAGT GAGCACCTCT CATCACTAAG AAATCTTTGT GAGCTGTTGG ATGTTGAGCC CCCATCTGAG TCTGACCTTG AGTATTCTTG GCTAAACTTG GCTGCGCATC ATCCTTTAAG AATGGTGTTG AGACAAAAGA TAATATATTC AGGTGCTGTG AACCTAGATG ATGAGAAGAT TCCTACCATT GTCAAAACAA TCCAAAATAA GTTGTCTTCC ACTTTCACTC GAGGTGCGCA AAAATTGCTG TCTGAAGCTA TCAACAAATC TGCATTCCAA AGTTCCATTG CATCTGGCTT TGTAGGATTG TGCAGAACAT TGGGTAGCAA ATGTGTTCGG GGACCAAATA AAGAGAATCT GTATATTAAG TCCATTCAGT CTCTGATTTC TGATGTCAAG GGAATCAAAT TGTTGACAAA TTCTAATGGC ATTCAATATT GGCAAGTTCC GCTAGAACTT AGAAATGGAA GTGGAGGTGA AAGTGTGGTC AGTTATTTCA GACCCTTGTT ATGGGATTAT ATGTGCATCT CCTTATCAAC TGCAATAGAA CTGGGTGCAT GGGTCTTAGG GGAACCTAAG ACAGTTAAGG TGTTTGATTT TTTCAAACAT AACCCTTGTG ACTATTTTCC CTTAAAGCCA ACTGCATCAA AACTATTGGA GGATAGGGTT GGTTTGAATC ACATCATTCA TTCTTTAAGA AGGCTGTACC CATCAGTGTT TGAGAAACAC ATATTACCAT TCATGAGCGA TCTAGCGTCA ACCAAAATGA AGTGGTCACC CAGAATAAAA TTTCTAGATC TCTGTGTAGC GTTGGATGTT AACTGTGAAG CCTTGTCTCT TGTCTCACAC ATAGTAAAAT GGAAAAGAGA GGAACATTAC ATTGTGTTAT CATCTGAATT GAGGTTGTCT CACAGTAGGA CACATGAACC CATGGTGGAA GAAAGAGTAG TGAGCACTAG TGATGCTGTT GACAATTTCA TGAGGCAAAT TTATTTTGAG TCTTACGTGA GACCATTTGT TGCGACTACA AGAACATTGG GGTCCTTCAC GTGGTTTCCA CACAAGACAT CAGTTCCAGA GGGTGAAGGG TTGCATAGAA TGGGTCCATT TTCTTCATTT GTAGAGAAAG TTATTCACAA AGGTGTTGAA AGGCCAATGT TTAAGCATGA TCTGATGATG GGTTATGCTT GGATAGACTT TGATATTGAG CCAGCTAGAT TCAATCAAAA TCAATTGATC GCATCAGGTT TAGTTGATCC TAAGTTTGAC TCATTGGAGG ATTTCTTTGA TGCCGTAGCT TCACTACCTC CAGGGTCTGC AAAACTGAGT CAGACAGTGA GGTTCCGTGT TAAAAGTCAA GATGCTAGTT TTAAGGAAAG CTTTGCCATC CACCTTGAGT ATACTGGCTC AATGAATCAA CAGGCCAAGT ATCTAGTACA TGATGTAACC GTTATGTACT CAGGTGCAGT GAGTCCGTGT GTCTTGTCAG ACTGTTGGAG ACTGGTTTTG TCAGGACCTA CTTTCAAGGG CAAATCAGCA TGGTATGTTG ACACCGAGAT CATTAATGAG TTTTTAATTG ACACAAATCA ACTAGGGCAT GTGACCCCTG TTGAGATTGT TGTTGATATG GAAAGGTTGC AGTTTACGGA GTATGACTTT GTATTGGTGG GTCCTTGCAC TGAACCAACC CCCCTGGTTG TGCATAGGGG AGGCTTGTGG GAATGTGGAA AGAAATTGGC ATCCTTTACA CCTGTTATAC AAGACCAGGA TCTTGAGATA TTTGTGAGAG AGGTTGGGGA CACTTCGTCT GACCTGCTGA TTGGGGCATT GAGTGATATG ATGATAGACA GGCTGGGGTT AAGGATGCAG TGGTCAGGGG TGGACATTGT CTCCACACTT AGGGCTGCAG CGCCGAGTTG TGAGGGGATC TTGAGTGCGG TTCTTGAGGC AGTGGACAAC TGGGTGGAGT TCAAGGGTTA TGCTCTCTGT TATAGTAAGT CAAGGGGAAA GGTGATGGTA CAATCAAGTG GTGGTAAATT GAGATTGAAG GGCAGAACAT GTGAGGAGCT GACTAGGAAG GATGAATGCA TCGAAGACAT TGAG