AcbaC.00102.a
2-dehydro-3-deoxyphosphooctonate aldolase
CENTER ID:
AcbaC.00102.a
ORGANISM:
Acinetobacter baumannii AB5075-UW
ASSOCIATED DISEASE:
CURRENT STATUS:
in PDB
COMMUNITY REQUEST:
True
NIH RISK GROUP:
2
SELECT AGENT:
False
NIH PRIORITY
pathogens category:
unclassified
Ordering Clones & Proteins
If there are materials available for this target, they will be listed below.
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Clones*
CENTER
REFERENCE ID
DOMAIN/REGION
DESCRIPTION
INFO
AA
START
AA
STOP
ORDER
MATERIAL
AcbaC.00102.a.B1.GE38583
full length
info
1
285
AcbaC.00102.a.B1.GE38583
AcbaC.00102.a.B3.GE40439
truncation 2
info
5
285
AcbaC.00102.a.B3.GE40439
AcbaC.00102.a.B5.GE40440
truncation 4
info
7
284
AcbaC.00102.a.B5.GE40440
* SSGCID clones represent un-induced expression constructs which have been verified by sequencing from vector primers. Clones may contain a tag, such as N-term 6xHis . Get sequence information
using the button in the "info" column.
Proteins
CENTER REFERENCE ID
DOMAIN/REGION DESCRIPTION
INFO
AA START
AA STOP
ORDER MATERIAL
AcbaC.00102.a.B3.PS38194
truncation 2
info
5
285
PS38194
AcbaC.00102.a.B1.PW37676
full length
info
1
285
PW37676
Structures
6BNG
DEPOSITED: 11/16/2017
DETERMINATION: XRay
CLONE: AcbaC.00102.a.B3.GE40439
PROTEIN: AcbaC.00102.a.B3.PS38194
Publications by SSGCID
Toward a structome of Acinetobacter baumannii drug targets
Abendroth J, Barrett LK, Dranow DM, Edwards TE, Lorimer DD, Myler PJ, Phan I, Staker B, Subramanian S, Van Voorhis WC, Craig JC, Chun IKH, Barrett KF, Prentice RA, Tillery L, Shek P
Protein Sci. - 2020
volume 29, issue 3, pages 789-802
PDB:
4YL5 ,
4YWR ,
4ZIY ,
4ZJU ,
4ZN6 ,
4ZR8 ,
5BT8 ,
5CC8 ,
5CM7 ,
5CY4 ,
5DD7 ,
5E3I ,
5EKS ,
5EO6 ,
5HA4 ,
5IDV ,
5J3B ,
5KHA ,
5U7S ,
5UDF ,
5URB ,
5VMB ,
5VMK ,
5VPU ,
6AMY ,
6AMZ ,
6BNG ,
6BQY ,
6BQZ ,
6C49 ,
6CAU ,
6D6K ,
6MFM ,
6MPR ,
6MRF
Sequences
These sequences are the native gene sequence; sequences of constructs derived from these sequences may differ due to codon optimization or other protocols.
To find the specific sequence of any material you may have ordered, click on the "info" button next to the name of that material.
AA Sequence
MSQLKPQEVV RLGDIQMANH LPFVLFGGMN VLESKDLAFE IAETYIDICK RLDIPYVFKA SFDKANRSSL HSFRGPGLEK GIEWLGDIKK HFNVPIITDV HEPYQAAPVA EVADIIQLPA FLSRQTDLVE AMAKTQAIIN IKKAQFLAPH EMRHILHKCL EAGNDKLILC ERGSAFGYNN LVVDMLGFDI MKEMNVPVFF DVTHALQTPG GRSDSAGGRR AQITTLARAG MATGLAGLFL ESHPDPDKAK CDGPSALRLS QLEPFLAQLK ELDTLVKGFK KLDTH
NT Sequence
ATGTCACAAT TAAAACCACA AGAAGTTGTA CGTTTAGGCG ATATACAAAT GGCAAATCAT TTGCCATTTG TATTATTTGG CGGAATGAAC GTACTCGAGT CAAAAGATTT AGCTTTTGAA ATTGCTGAAA CTTATATTGA TATTTGTAAA CGCCTGGATA TTCCTTATGT ATTTAAGGCG AGTTTTGATA AAGCAAACCG TTCTAGTTTG CATTCATTCC GTGGTCCTGG ACTTGAAAAA GGTATTGAAT GGTTAGGCGA CATTAAAAAA CATTTTAATG TACCAATTAT TACCGACGTT CACGAACCAT ATCAGGCAGC GCCAGTTGCC GAAGTCGCTG ATATTATCCA GCTTCCTGCT TTCTTAAGCC GTCAAACTGA TCTTGTTGAA GCAATGGCGA AAACCCAAGC TATTATCAAC ATTAAAAAAG CACAGTTCTT GGCTCCTCAT GAAATGCGCC ATATTTTGCA TAAATGTTTA GAAGCGGGAA ATGACAAACT TATTCTTTGT GAGCGTGGCT CAGCATTTGG CTATAACAAT TTAGTTGTAG ACATGCTTGG CTTTGACATC ATGAAAGAAA TGAATGTACC TGTATTCTTT GACGTGACTC ATGCTTTACA AACTCCAGGT GGTCGTTCGG ATTCAGCTGG TGGTCGCCGT GCTCAAATTA CAACATTGGC ACGTGCTGGT ATGGCAACAG GTTTAGCGGG ATTATTCCTA GAGTCTCATC CAGATCCAGA CAAAGCAAAA TGTGATGGAC CATCTGCATT GCGCTTGTCA CAGCTTGAGC CATTCTTGGC ACAACTAAAA GAATTGGATA CTTTAGTTAA AGGATTCAAA AAGTTAGATA CTCATTGA
Details for AcbaC.00102.a.B1.GE38583
HARVESTED ON:
11/19/2014
SEQUENCED ON:
12/10/2014
EXPECTED MW:
33kDa
OBSERVED MW:
33kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Too many to count (100+)
TOTAL EXPRESSION LEVEL:
Moderate Expression
SOLUBLE EXPRESSION LEVEL
Moderate Expression
EXPRESSION HOST:
data unavailable
SEQUENCING RESULT:
PERCENT IDENTITY:
99
PERCENT COVERAGE:
100
Details for AcbaC.00102.a.B3.GE40439
HARVESTED ON:
8/10/2016
SEQUENCED ON:
8/11/2016
EXPECTED MW:
32kDa
OBSERVED MW:
32kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Good (10-50)
TOTAL EXPRESSION LEVEL:
Moderate Expression
SOLUBLE EXPRESSION LEVEL
Moderate Expression
EXPRESSION HOST:
BL 21 (DE3) Rosetta
SEQUENCING RESULT:
PERCENT IDENTITY:
data unavailable
PERCENT COVERAGE:
data unavailable
Details for AcbaC.00102.a.B5.GE40440
HARVESTED ON:
8/10/2016
SEQUENCED ON:
8/11/2016
EXPECTED MW:
32kDa
OBSERVED MW:
32kDa
ANTIBIOTIC MARKER:
ampicillin
COUNT OF EXPRESSION COLONIES:
Good (10-50)
TOTAL EXPRESSION LEVEL:
Moderate Expression
SOLUBLE EXPRESSION LEVEL
Moderate Expression
EXPRESSION HOST:
BL 21 (DE3) Rosetta
SEQUENCING RESULT:
PERCENT IDENTITY:
data unavailable
PERCENT COVERAGE:
data unavailable
Details for AcbaC.00102.a.B3.PS38194
PURIFICATION DATe:
2/7/2017
CONCENTRATION:
70.39mg/ml
OBSERVED MW:
30kDa
EXPRESSION LEVEL:
Moderate Expression
PROTEIN PURIFICATION BUFFER:
20 mM HEPES pH 7.0, 300 mM NaCl,5% Glycerol, 1 mM TCEP
EXPRESSION HOST:
BL 21 (DE3) Rosetta
VIAL COUNT (approx.):
4
VIAL VOLUME:
200µl
PERCENT IDENTITY:
data unavailable
PERCENT COVERAGE:
data unavailable
Details for AcbaC.00102.a.B1.PW37676
PURIFICATION DATe:
3/17/2015
CONCENTRATION:
32mg/ml
OBSERVED MW:
34kDa
EXPRESSION LEVEL:
Low Expression
PROTEIN PURIFICATION BUFFER:
25 mM HEPES pH 7.0, 500 mM NaCl, 5% Glycerol , 2 mM DTT, and 0.025% Azide
EXPRESSION HOST:
data unavailable
VIAL COUNT (approx.):
11
VIAL VOLUME:
200µl
PERCENT IDENTITY:
99
PERCENT COVERAGE:
100